RNA id: TU117354



Basic Information


Item Value
RNA id TU117354
length 212
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G94074
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 28425032 ~ 28425243 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atcaacccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacacttcttcacacagagaggcgtcacaatctgaacaaactccccagcgatgtggctgtagagacaatttgggaacattcaaaaacagactggataggatccttgatcacttag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU117353 lncRNA downstream 4770 28419916 ~ 28420262 (-) True G94073
TU117336 lncRNA downstream 327874 28093468 ~ 28097158 (-) True G94060
TU117305 lncRNA downstream 585242 27838251 ~ 27839790 (-) False AMCG00017902
TU117425 lncRNA upstream 308581 28733824 ~ 28735744 (-) True G94137
TU117522 lncRNA upstream 782227 29207470 ~ 29207804 (-) True G94218
TU117556 lncRNA upstream 860964 29286207 ~ 29286747 (-) True G94246
TU117670 lncRNA upstream 1486739 29911982 ~ 29914837 (-) True G94337
TU117708 lncRNA upstream 1571006 29996249 ~ 29997513 (-) True G94358
AMCG00017906 mRNA downstream 304391 28098905 ~ 28120641 (-) False AMCG00017906
AMCG00017903 mRNA downstream 580261 27842212 ~ 27844771 (-) True AMCG00017903
AMCG00017902 mRNA downstream 585351 27838254 ~ 27839681 (-) False AMCG00017902
AMCG00017899 mRNA downstream 701301 27698901 ~ 27723731 (-) True AMCG00017899
AMCG00017895 mRNA downstream 992456 27427479 ~ 27432576 (-) True AMCG00017895
AMCG00017907 mRNA upstream 8789 28434032 ~ 28443288 (-) True AMCG00017907
AMCG00017908 mRNA upstream 32453 28457696 ~ 28457938 (-) True AMCG00017908
AMCG00017909 mRNA upstream 143717 28568960 ~ 28569655 (-) True AMCG00017909
AMCG00017911 mRNA upstream 224698 28649941 ~ 28664695 (-) True AMCG00017911
AMCG00017916 mRNA upstream 269305 28694548 ~ 28698519 (-) True AMCG00017916
TU117337 other downstream 280443 28103299 ~ 28144589 (-) True AMCG00017906
TU117034 other downstream 2314958 26109060 ~ 26110074 (-) True G93796
TU117033 other downstream 2317227 26104026 ~ 26107805 (-) True G93795
TU116981 other downstream 2409540 26012661 ~ 26015492 (-) False AMCG00017866
TU117465 other upstream 448918 28874161 ~ 28875923 (-) True G94172
TU117547 other upstream 843992 29269235 ~ 29273168 (-) True G94238
TU117930 other upstream 2202745 30627988 ~ 30658493 (-) True G94543
TU118224 other upstream 3837533 32262776 ~ 32263531 (-) False AMCG00018000
TU118225 other upstream 3846451 32271694 ~ 32276372 (-) True AMCG00018004

Expression Profile