RNA id: TU117630



Basic Information


Item Value
RNA id TU117630
length 248
lncRNA type inter_gene
GC content 0.64
exon number 1
gene id G94308
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 29577156 ~ 29577403 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCAGGATGTATCCCCGGACGTAGTCGCGCAGCGTCCAGCCCAGGCCGTGCAGGATGTGCAGCACCTCCTCCTGCTTCAGAACGCTGAAGAGCCGGTCCAGCAGGATCTTGAGGCGCACGGGCACGGCCTGCGTGCCGTACAGCATGAGGCTGCTGATGTCGAACACCACGTTGGACTGCACGATCTCCACCTGCGTGGGGTGGTACAGGTGCTGCGTGCTCAGCTTGTCCAGCGCTGACCGGTAGTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU117571 lncRNA upstream 253811 29322572 ~ 29323345 (+) True G94260
TU117566 lncRNA upstream 266303 29307100 ~ 29310853 (+) True G94255
TU117555 lncRNA upstream 290411 29286193 ~ 29286745 (+) True G94245
TU117545 lncRNA upstream 303145 29273747 ~ 29274011 (+) True G94236
TU117487 lncRNA upstream 535212 29040010 ~ 29041944 (+) True G94189
TU117632 lncRNA downstream 73387 29650790 ~ 29651074 (+) True G94310
TU117684 lncRNA downstream 400750 29978153 ~ 29980642 (+) True G94348
TU117880 lncRNA downstream 961565 30538968 ~ 30544554 (+) True G94505
TU117900 lncRNA downstream 1008307 30585710 ~ 30591176 (+) True G94522
TU117945 lncRNA downstream 1140775 30718178 ~ 30722318 (+) True G94555
AMCG00017936 mRNA upstream 160343 29368771 ~ 29416813 (+) True AMCG00017936
AMCG00017931 mRNA upstream 223269 29342195 ~ 29353887 (+) True AMCG00017931
AMCG00017927 mRNA upstream 319449 29250387 ~ 29257707 (+) True AMCG00017927
AMCG00017921 mRNA upstream 516432 29056616 ~ 29060724 (+) True AMCG00017921
AMCG00017923 mRNA upstream 521629 29051154 ~ 29055527 (+) True AMCG00017923
AMCG00017940 mRNA downstream 163531 29740934 ~ 29756915 (+) True AMCG00017940
AMCG00017941 mRNA downstream 180151 29757554 ~ 29764700 (+) True AMCG00017941
AMCG00017942 mRNA downstream 229237 29806640 ~ 29833363 (+) True AMCG00017942
AMCG00017943 mRNA downstream 325412 29902815 ~ 29912178 (+) True AMCG00017943
AMCG00017946 mRNA downstream 376064 29953467 ~ 29954534 (+) True AMCG00017946
TU117593 other upstream 126809 29433412 ~ 29450347 (+) True G94275
TU117380 other upstream 933173 28642730 ~ 28643983 (+) False AMCG00017910
TU116638 other upstream 4861535 24705379 ~ 24715621 (+) False AMCG00017829
TU115792 other upstream 8755209 20820511 ~ 20821947 (+) False AMCG00017747
TU115788 other upstream 8761610 20799595 ~ 20815546 (+) False AMCG00017747
TU118260 other downstream 2830026 32407429 ~ 32411373 (+) False AMCG00018012
TU118291 other downstream 2883895 32461298 ~ 32465063 (+) True G94838
TU118319 other downstream 2930287 32507690 ~ 32601449 (+) True G94857

Expression Profile