RNA id: TU117984



Basic Information


Item Value
RNA id TU117984
length 221
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G94591
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 31395146 ~ 31395366 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ccaatcgagcatctgtgggatgtgctggacaaacaagtccgatccatggaggccccacctcccaacttacaggacttaaaggatctgctgctaacgtcttggtgccagataccacagcacaccttcagaggtctagtggagtccatgcctcgatgggtcagggctgttttgggacctacacaatattaggcaggtggtcataatgttatggctgatcggtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU117975 lncRNA upstream 54314 31324524 ~ 31340832 (+) True G94583
TU117957 lncRNA upstream 563283 30827442 ~ 30831863 (+) True AMCG00017978
TU117945 lncRNA upstream 672828 30718178 ~ 30722318 (+) True G94555
TU117900 lncRNA upstream 803970 30585710 ~ 30591176 (+) True G94522
TU117880 lncRNA upstream 850592 30538968 ~ 30544554 (+) True G94505
TU117987 lncRNA downstream 22483 31417849 ~ 31418120 (+) True G94594
TU117992 lncRNA downstream 121462 31516828 ~ 31517029 (+) True G94599
TU117996 lncRNA downstream 204394 31599760 ~ 31603112 (+) True G94601
TU118004 lncRNA downstream 227090 31622456 ~ 31623543 (+) True G94609
TU118014 lncRNA downstream 233239 31628605 ~ 31629313 (+) True G94613
AMCG00017978 mRNA upstream 563279 30819869 ~ 30831867 (+) False AMCG00017978
AMCG00017973 mRNA upstream 738222 30656133 ~ 30656924 (+) True AMCG00017973
AMCG00017968 mRNA upstream 763911 30620823 ~ 30631235 (+) True AMCG00017968
AMCG00017969 mRNA upstream 780812 30611050 ~ 30614334 (+) True AMCG00017969
AMCG00017970 mRNA upstream 790903 30596996 ~ 30604243 (+) True AMCG00017970
AMCG00017980 mRNA downstream 213852 31609218 ~ 31621106 (+) True AMCG00017980
AMCG00017982 mRNA downstream 250459 31645825 ~ 31649592 (+) True AMCG00017982
AMCG00017981 mRNA downstream 264535 31659901 ~ 31675037 (+) True AMCG00017981
AMCG00017985 mRNA downstream 345202 31740568 ~ 31745981 (+) True AMCG00017985
AMCG00017989 mRNA downstream 719795 32115161 ~ 32123373 (+) True AMCG00017989
TU117593 other upstream 1944799 29433412 ~ 29450347 (+) True G94275
TU117380 other upstream 2751163 28642730 ~ 28643983 (+) False AMCG00017910
TU116638 other upstream 6679525 24705379 ~ 24715621 (+) False AMCG00017829
TU115792 other upstream 10573199 20820511 ~ 20821947 (+) False AMCG00017747
TU115788 other upstream 10579600 20799595 ~ 20815546 (+) False AMCG00017747
TU118260 other downstream 1012063 32407429 ~ 32411373 (+) False AMCG00018012
TU118291 other downstream 1065932 32461298 ~ 32465063 (+) True G94838
TU118319 other downstream 1112324 32507690 ~ 32601449 (+) True G94857

Expression Profile