RNA id: TU118061


Basic Information

Item Value
RNA id TU118061
length 334
lncRNA type inter_gene
GC content 0.57
exon number 2
gene id G94655
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 31741224 ~ 31741659 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AAAGCACCTTTCTGGTTGACGTGCCGCGTGGTCCCGTCGGGCAGCAGCCGGGACCAGCAGAAGGACAGGCGATAGTGCGTGAGTCCAAGCTGCGTGATGCACCTGAGGTCCTCCTCCCAGAGCTCGTAGCTGTTGCAAGCCACGTCCCCGGTCTGGTCCTCAAACACCCGGCCTTTCTCGTGGCAGAAGGTGTCCCAGATGCTGGGACCTTTGCCATCCGCGTTCCACCCTCCTAAACGCTGTCAGCGTAAAAAACAGTGCGTTATGAAACGGCTCAGACATCTGGAGTGGAGAAATCGAACTGGAGGAATTGGAGAAAGCCACTGTGTCTTGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118024 lncRNA downstream 118846 31621600 ~ 31622378 (-) True G94622
TU117993 lncRNA downstream 224188 31516832 ~ 31517036 (-) True G94600
TU117991 lncRNA downstream 282970 31457879 ~ 31458254 (-) True G94598
TU117982 lncRNA downstream 360999 31379255 ~ 31380225 (-) True G94590
TU117983 lncRNA downstream 360999 31379255 ~ 31380225 (-) False G94590
TU118071 lncRNA upstream 86800 31828459 ~ 31828800 (-) True G94665
TU118171 lncRNA upstream 450524 32192183 ~ 32196606 (-) True G94747
TU118233 lncRNA upstream 603591 32345250 ~ 32346583 (-) True G94791
TU118408 lncRNA upstream 914371 32656030 ~ 32661641 (-) True AMCG00018020
TU118424 lncRNA upstream 1048120 32789779 ~ 32790688 (-) True G94927
AMCG00017986 mRNA downstream 25791 31692327 ~ 31715433 (-) True AMCG00017986
AMCG00017984 mRNA downstream 97026 31622945 ~ 31644198 (-) True AMCG00017984
AMCG00017983 mRNA downstream 133525 31599658 ~ 31607699 (-) True AMCG00017983
AMCG00017979 mRNA downstream 758321 30981050 ~ 30982903 (-) True AMCG00017979
AMCG00017975 mRNA downstream 892995 30832793 ~ 30848229 (-) True AMCG00017975
AMCG00017987 mRNA upstream 121070 31862729 ~ 31883678 (-) True AMCG00017987
AMCG00017988 mRNA upstream 150814 31892473 ~ 31894806 (-) True AMCG00017988
AMCG00017991 mRNA upstream 346488 32088147 ~ 32111464 (-) True AMCG00017991
AMCG00017992 mRNA upstream 381471 32123130 ~ 32140451 (-) True AMCG00017992
AMCG00017990 mRNA upstream 402157 32143816 ~ 32151676 (-) True AMCG00017990
TU117930 other downstream 1082731 30627988 ~ 30658493 (-) True G94543
TU117547 other downstream 2468056 29269235 ~ 29273168 (-) True G94238
TU117465 other downstream 2865301 28874161 ~ 28875923 (-) True G94172
TU117337 other downstream 3596635 28103299 ~ 28144589 (-) True AMCG00017906
TU117034 other downstream 5631150 26109060 ~ 26110074 (-) True G93796
TU118224 other upstream 521117 32262776 ~ 32263531 (-) False AMCG00018000
TU118225 other upstream 530035 32271694 ~ 32276372 (-) True AMCG00018004
TU118217 other upstream 552361 32294020 ~ 32295433 (-) False AMCG00018007
TU118287 other upstream 713426 32455085 ~ 32456410 (-) True G94835
TU118334 other upstream 861259 32602918 ~ 32605751 (-) False AMCG00018021

Expression Profile