RNA id: TU118424


Basic Information

Item Value
RNA id TU118424
length 531
lncRNA type inter_gene
GC content 0.62
exon number 3
gene id G94927
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32789779 ~ 32790688 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTGTGTCCGgtccctgctgtgtgtgtgtgacagtgtgagtctcagtgtgtgtgtgtgtgtgtgtgtgtccGTCCGAGTCTCAGTGCgtctctgtgagtgtgtctgtgtccggtccctgctgtgtgtgtgtgacagtgtgagtctcagtgtgtgtgtccgaTCCCTGGGTGCCCCGGCGGCCCTACCCTTCAGCTGCGCCACCACGCTGCTCAGGTAGCTCTTGAGCTGCGGGTCGGTGGTCATGTGCAGGCTCAGGTCGTACTGGGTCACCCGGGTGAAGCTCTCGGGCGGGTACACGCCGCGCTGATATAAGATGCTGTTGATGCCGAAAAGAAGAACTCCGCCACCAGCTCGGTGCTGCCCTTCAGCGTGATGCCGGTCAGGGTGCTGGACATGGCGCCGCTGTGCTGGCCGGGTCGGTGCGGGTTTATCGAGTCTGACTGACTGCAGCTCCTCTGGCGGATCCGCGCAACGTCGGTTTGCCTCCGCAGGATTTGAAATCCCCGCGTCACCAGCGTGCGCACGCATGCG

Function

GO: NA

KEGG:

id description
ko04114 Oocyte meiosis

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118408 lncRNA downstream 128138 32656030 ~ 32661641 (-) True AMCG00018020
TU118233 lncRNA downstream 443196 32345250 ~ 32346583 (-) True G94791
TU118171 lncRNA downstream 593173 32192183 ~ 32196606 (-) True G94747
TU118071 lncRNA downstream 960979 31828459 ~ 31828800 (-) True G94665
TU118061 lncRNA downstream 1048120 31741224 ~ 31741659 (-) True G94655
TU118438 lncRNA upstream 57578 32848266 ~ 32848466 (-) True G94936
AMCG00018022 mRNA downstream 13699 32767245 ~ 32776080 (-) True AMCG00018022
AMCG00018024 mRNA downstream 76156 32694960 ~ 32713623 (-) True AMCG00018024
AMCG00018025 mRNA downstream 98908 32688381 ~ 32690871 (-) True AMCG00018025
AMCG00018023 mRNA downstream 105171 32680587 ~ 32684608 (-) True AMCG00018023
AMCG00018020 mRNA downstream 124664 32658429 ~ 32665115 (-) False AMCG00018020
AMCG00018029 mRNA upstream 5196 32795884 ~ 32819447 (-) True AMCG00018029
AMCG00018028 mRNA upstream 45943 32836631 ~ 32847899 (-) True AMCG00018028
AMCG00018032 mRNA upstream 61116 32851804 ~ 32864532 (-) True AMCG00018032
AMCG00018031 mRNA upstream 76633 32867321 ~ 32889902 (-) True AMCG00018031
TU118371 other downstream 137095 32648464 ~ 32652684 (-) False G94887
TU118375 other downstream 137095 32648464 ~ 32652684 (-) True G94887
TU118334 other downstream 184028 32602918 ~ 32605751 (-) False AMCG00018021
TU118287 other downstream 333369 32455085 ~ 32456410 (-) True G94835
TU118217 other downstream 494346 32294020 ~ 32295433 (-) False AMCG00018007

Expression Profile