RNA id: AMCG00018053


Basic Information

Item Value
RNA id AMCG00018053
length 225
RNA type mRNA
GC content 0.72
exon number 2
gene id AMCG00018053
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 513340 ~ 513737 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atGCGCGGCACACCGCCCAGCACGGTGCACCAGAGGCACGCCGAGGGCCGCAGGGGGCAGGTCCTGCACAAGCGCGTCAGGGGGCCGGCAGCGGCAGCGGGCACAAGCCAGCTCCTCCGGCAGCCCGGCACCTCCAAGAGAGCCGCCTACGCCAGCACCAGGCGCAGGGCAGCCACAGACAACGGCGCCGGACAGGAGCTCCGGGCCAAGAAGGGATTGGACTGA

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0007275 multicellular organism development biological_process
GO:0048856 anatomical structure development biological_process
GO:0032502 developmental process biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142757 lncRNA upstream 41216 468788 ~ 472124 (+) True G114018
TU142803 lncRNA downstream 39473 553210 ~ 553504 (+) True G114056
TU143011 lncRNA downstream 649155 1162892 ~ 1178095 (+) True G114205
TU143047 lncRNA downstream 753103 1266840 ~ 1268893 (+) True G114237
TU143063 lncRNA downstream 776818 1290555 ~ 1291851 (+) True G114253
TU143096 lncRNA downstream 1019738 1533475 ~ 1534982 (+) True G114274
AMCG00018050 mRNA upstream 319 501542 ~ 513021 (+) True AMCG00018050
AMCG00018051 mRNA upstream 13874 490119 ~ 499466 (+) True AMCG00018051
AMCG00018043 mRNA upstream 45346 465505 ~ 467994 (+) True AMCG00018043
AMCG00018046 mRNA upstream 68290 440190 ~ 445050 (+) True AMCG00018046
AMCG00018045 mRNA upstream 82709 429053 ~ 430631 (+) True AMCG00018045
AMCG00018049 mRNA downstream 2799 516536 ~ 520955 (+) True AMCG00018049
AMCG00018057 mRNA downstream 61367 575104 ~ 575385 (+) True AMCG00018057
AMCG00018052 mRNA downstream 64311 578048 ~ 578311 (+) True AMCG00018052
AMCG00018060 mRNA downstream 90593 604330 ~ 609917 (+) True AMCG00018060
AMCG00018061 mRNA downstream 98752 612489 ~ 615795 (+) True AMCG00018061
TU142799 other downstream 61523 575260 ~ 579704 (+) True G114053
TU142800 other downstream 61523 575260 ~ 579704 (+) False G114053
TU142895 other downstream 263646 777383 ~ 794790 (+) True G114123
TU142941 other downstream 357608 871345 ~ 878979 (+) False AMCG00018072
TU143029 other downstream 706042 1219779 ~ 1220216 (+) True G114219

Expression Profile