Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00018061 |
| length | 820 |
| RNA type | mRNA |
| GC content | 0.62 |
| exon number | 4 |
| gene id | AMCG00018061 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 612489 ~ 615795 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006644 | phospholipid metabolic process | biological_process |
| GO:0016042 | lipid catabolic process | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| GO:0004623 | phospholipase A2 activity | molecular_function |
| id | description |
|---|---|
| K01047 | PLA2G, SPLA2; secretory phospholipase A2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU142803 | lncRNA | upstream | 58985 | 553210 ~ 553504 (+) | True | G114056 |
| TU142757 | lncRNA | upstream | 140365 | 468788 ~ 472124 (+) | True | G114018 |
| TU143011 | lncRNA | downstream | 547097 | 1162892 ~ 1178095 (+) | True | G114205 |
| TU143047 | lncRNA | downstream | 651045 | 1266840 ~ 1268893 (+) | True | G114237 |
| TU143063 | lncRNA | downstream | 674760 | 1290555 ~ 1291851 (+) | True | G114253 |
| TU143096 | lncRNA | downstream | 917680 | 1533475 ~ 1534982 (+) | True | G114274 |
| TU143130 | lncRNA | downstream | 1248762 | 1864557 ~ 1865570 (+) | True | G114299 |
| AMCG00018060 | mRNA | upstream | 2572 | 604330 ~ 609917 (+) | True | AMCG00018060 |
| AMCG00018052 | mRNA | upstream | 34178 | 578048 ~ 578311 (+) | True | AMCG00018052 |
| AMCG00018057 | mRNA | upstream | 37104 | 575104 ~ 575385 (+) | True | AMCG00018057 |
| AMCG00018049 | mRNA | upstream | 91534 | 516536 ~ 520955 (+) | True | AMCG00018049 |
| AMCG00018053 | mRNA | upstream | 98752 | 513340 ~ 513737 (+) | True | AMCG00018053 |
| AMCG00018062 | mRNA | downstream | 7183 | 622978 ~ 637087 (+) | True | AMCG00018062 |
| AMCG00018059 | mRNA | downstream | 41887 | 657682 ~ 662116 (+) | True | AMCG00018059 |
| AMCG00018058 | mRNA | downstream | 52159 | 667954 ~ 671836 (+) | True | AMCG00018058 |
| AMCG00018068 | mRNA | downstream | 121345 | 737140 ~ 739283 (+) | True | AMCG00018068 |
| AMCG00018070 | mRNA | downstream | 130880 | 746675 ~ 759719 (+) | True | AMCG00018070 |
| TU142799 | other | upstream | 32785 | 575260 ~ 579704 (+) | True | G114053 |
| TU142895 | other | downstream | 161588 | 777383 ~ 794790 (+) | True | G114123 |
| TU142941 | other | downstream | 255550 | 871345 ~ 878979 (+) | False | AMCG00018072 |
| TU143029 | other | downstream | 603984 | 1219779 ~ 1220216 (+) | True | G114219 |
| TU143157 | other | downstream | 1332046 | 1947841 ~ 1949593 (+) | True | G114320 |
| TU143165 | other | downstream | 1357131 | 1972926 ~ 1973683 (+) | False | AMCG00018105 |
