RNA id: AMCG00018067


Basic Information

Item Value
RNA id AMCG00018067
length 1474
RNA type mRNA
GC content 0.60
exon number 8
gene id AMCG00018067
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 617211 ~ 622245 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GAACAAAGTTGACGTTGAGTTCCGGCTGTACGCGCTTGGcgatgtaaataatatatttctacaCAGGACCGCTTTCATACCGTCTAGCAATGATGTAACCCGCAACTCAGTGACGAACCACTTTTGAAAAGcCTGCTTAAATGTCCAAAACATGCCGCCCATCTGTGAGTGAAGAACCTGGCCTCCAGGAGGAGCCCTAATGACCCACATGCCCCTGACAGGAGATGGCGATCCTGGAGCCTTTTCCATTGATCCAGACCCCCCCGCCAGGGCGGCCGGCAGCCTGGTCTCCGAGAATGAGTTCTCCTGCCACTGCTGCTACGACGTCCTGGTGGACCCCACCACTCTGAACTGCGGGCACAGCTTCTGCCGGCACTGTCTGGCGCAGTGGTGGGAATCCTCACGCAAGAACGAGTGCCCGGAGTGCCGAGACAAGTGGGAGGGCTTTCCCAAAGTCAACATCCTGCTGAGGGACGCTGTGCTGAAGTTCTTCCCTGGGGACGTGCGTCGGAGGCGGGAGGAGATCCAGCTGAATCCCAAGATCACTCGCAGCCTCCAGGCCTTCAGGAAGTATGGGGAGGAGCAGGCCTCCAGGGGGGCCCGGCTGAGCGGCCCGCGGGTGCAAGGGGGCGGCTTCTTCTCTGGGGTCCTGACCGCTTTGACCTGCGTGGCGGTGATGCTGCTGGTGTACCACTGGAGTAGCCGGGAAGCAGAGCAGGACCTCCTGGTGCACAAGCCTGTGACTAAGTGGACCGCGGAGGAGGTCACCCTGTGGCTGGAGCAGCTCGGCCCCTGGGCTTCTCTCTATAAGGACCGGTTTCTGCAGGAGCACGTCAATGGAAGACTGCTGATGATGCTGGGAGATGAGGAGTTTTCTCACCAGCCTTACAGCATGGAGAACCACTCCCACCGGAAGGCTGTTCTAGCAGAGCTGGAGCGCGTCAAAGCGCTGGGGGTCAAACCCCCCCAGAACCTCTGGGAGTACAAGgcagtgAATGCCGGCAAGTCTCTGTTCCTGCTGTATGCTATGAAGAGCTCCCCCCGCCTCACCCTGCTCTACCTGTACCTGTTCGACTACGCCAACACATTCCTGCCCTTCATGCACACCTGCTGCCTCGGGGGGAAGGCCGACCCGGAGGAGGAGGACGTGCTGACCAAATCCCTGCTGGAGGAGCCCAGCTGGAGGCAGTGGACCGAGTTCCTGGTGAAGTTCTGCCTGTTGCCCTACCAGCTGATCGCCGAGTTCGCCTGGGACTGGCTGGCGGTGCACTACTGGACATCCCGCTTCGTCATCCGCATGTGGAGCCACTTCTGGAAGGTGTCGATGCAGGGCGTGGCCGTGGCGATCGTCTGGCCCGTGATCCCCCAGTTCGTCTGCAACTGCCTGTTCTACTGGGCCCTGTACTTCAACCCCATCATCAACATCGACCTGGTGGTGCAGCAGGTGCTGCGGCTGGACACCCGCATGCCCTAG

Function

GO: NA

KEGG:

id description
K15684 BFAR; bifunctional apoptosis regulator

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142784 lncRNA downstream 117693 498327 ~ 499518 (-) True G114044
TU142769 lncRNA downstream 145087 468917 ~ 472124 (-) True G114030
TU142932 lncRNA upstream 174748 796993 ~ 800471 (-) False AMCG00018074
TU142957 lncRNA upstream 257066 879311 ~ 889088 (-) True G114166
TU142977 lncRNA upstream 280075 902320 ~ 903843 (-) True G114179
TU142981 lncRNA upstream 290986 913231 ~ 913641 (-) True G114183
TU143020 lncRNA upstream 540645 1162890 ~ 1166493 (-) True G114213
AMCG00018065 mRNA downstream 7322 591793 ~ 609889 (-) True AMCG00018065
AMCG00018063 mRNA downstream 26389 579900 ~ 590822 (-) True AMCG00018063
AMCG00018055 mRNA downstream 51629 558522 ~ 565582 (-) True AMCG00018055
AMCG00018056 mRNA downstream 65971 546786 ~ 551240 (-) True AMCG00018056
AMCG00018054 mRNA downstream 79217 536678 ~ 537994 (-) True AMCG00018054
AMCG00018064 mRNA upstream 29042 651287 ~ 658508 (-) True AMCG00018064
AMCG00018066 mRNA upstream 40004 662249 ~ 667911 (-) True AMCG00018066
AMCG00018074 mRNA upstream 155142 777387 ~ 800372 (-) True AMCG00018074
AMCG00018073 mRNA upstream 180475 802720 ~ 840922 (-) True AMCG00018073
AMCG00018078 mRNA upstream 267852 890097 ~ 901668 (-) True AMCG00018078
TU142760 other downstream 174787 441085 ~ 442424 (-) True G114021
TU142989 other upstream 301262 923507 ~ 926739 (-) False AMCG00018077
TU142990 other upstream 301262 923507 ~ 926739 (-) False AMCG00018077
TU143224 other upstream 1362904 1985149 ~ 2006636 (-) False AMCG00018113
TU143230 other upstream 1384661 2006906 ~ 2067584 (-) False AMCG00018111
TU143313 other upstream 1659455 2281700 ~ 2288862 (-) True G114430

Expression Profile