RNA id: AMCG00018086



Basic Information


Item Value
RNA id AMCG00018086
length 234
RNA type mRNA
GC content 0.59
exon number 3
gene id AMCG00018086
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 1207523 ~ 1208541 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCAACTAGGGATGGGCTTCAGTACAGGACCAACTCGTTCTGCGGGACGCCAGAATTCCTCACCCACGAAGTGCTGATGGAGGGGTCCTACTCTCGGGCCGTGGACTGGCCGTGCTCATCTTTGAGAAGCTGGTTTCCGAGCTGCCGAATGAGCCGGTCTGTCACCGAGGAGATAAGCACGGGGGTAGGGGCTCTGGATGTGCTAGAGGACTGGGAAGAGGGGACGAAGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU143020 lncRNA downstream 41030 1162890 ~ 1166493 (-) True G114213
TU142981 lncRNA downstream 293882 913231 ~ 913641 (-) True G114183
TU142977 lncRNA downstream 303680 902320 ~ 903843 (-) True G114179
TU142957 lncRNA downstream 318435 879311 ~ 889088 (-) True G114166
TU142932 lncRNA downstream 407052 796993 ~ 800471 (-) False AMCG00018074
TU143085 lncRNA upstream 59752 1268293 ~ 1268816 (-) True G114264
TU143095 lncRNA upstream 304452 1512993 ~ 1513642 (-) True G114273
TU143110 lncRNA upstream 324915 1533456 ~ 1534985 (-) True G114286
TU143139 lncRNA upstream 543355 1751896 ~ 1846771 (-) True G114304
TU143140 lncRNA upstream 633602 1842143 ~ 1878375 (-) False G114304
AMCG00018085 mRNA downstream 4350 1200739 ~ 1203173 (-) True AMCG00018085
AMCG00018083 mRNA downstream 22530 1167665 ~ 1184993 (-) True AMCG00018083
AMCG00018082 mRNA downstream 195158 1001676 ~ 1012365 (-) True AMCG00018082
AMCG00018079 mRNA downstream 228681 971766 ~ 978842 (-) True AMCG00018079
AMCG00018077 mRNA downstream 280819 922278 ~ 926704 (-) True AMCG00018077
AMCG00018087 mRNA upstream 8752 1217293 ~ 1237035 (-) True AMCG00018087
AMCG00018088 mRNA upstream 28709 1237250 ~ 1248772 (-) True AMCG00018088
AMCG00018090 mRNA upstream 64042 1272583 ~ 1291830 (-) True AMCG00018090
AMCG00018089 mRNA upstream 87025 1295566 ~ 1297934 (-) True AMCG00018089
AMCG00018092 mRNA upstream 328426 1536967 ~ 1537730 (-) True AMCG00018092
TU142989 other downstream 280784 923507 ~ 926739 (-) False AMCG00018077
TU142990 other downstream 280784 923507 ~ 926739 (-) False AMCG00018077
TU142760 other downstream 765099 441085 ~ 442424 (-) True G114021
TU143224 other upstream 776608 1985149 ~ 2006636 (-) False AMCG00018113
TU143230 other upstream 798365 2006906 ~ 2067584 (-) False AMCG00018111
TU143313 other upstream 1073159 2281700 ~ 2288862 (-) True G114430
TU143456 other upstream 1400604 2609145 ~ 2609479 (-) True G114549
TU143816 other upstream 2852270 4060811 ~ 4064248 (-) False G114838

Expression Profile