RNA id: AMCG00018092


Basic Information

Item Value
RNA id AMCG00018092
length 219
RNA type mRNA
GC content 0.60
exon number 2
gene id AMCG00018092
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 1536967 ~ 1537730 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGACAGCTTTTTCTCAGACCCAGAGGTCTTCTTTGAAGTGTCTCAGACCAGTTCTGGGGCCAGCGGTCCAGCCGGCGTGAACATGCAGCTCCTGGAGACGGATTACTCCCGCACCCTCCGCGATCTCGTGGAGCTCCACCTGTTCCACCAGAACAGCATCCCGGCCTTCCTTAGCGCAGTGACCCTCGACCTCTTCAGCCGGCAGACCATCGCCTGA

Function

GO:

id name namespace
GO:0007094 mitotic spindle assembly checkpoint biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU143110 lncRNA downstream 1982 1533456 ~ 1534985 (-) True G114286
TU143095 lncRNA downstream 23325 1512993 ~ 1513642 (-) True G114273
TU143085 lncRNA downstream 268151 1268293 ~ 1268816 (-) True G114264
TU143020 lncRNA downstream 370474 1162890 ~ 1166493 (-) True G114213
TU142981 lncRNA downstream 623326 913231 ~ 913641 (-) True G114183
TU143139 lncRNA upstream 214166 1751896 ~ 1846771 (-) True G114304
TU143140 lncRNA upstream 304413 1842143 ~ 1878375 (-) False G114304
TU143216 lncRNA upstream 445922 1983652 ~ 1984149 (-) True G114363
TU143220 lncRNA upstream 447419 1985149 ~ 1985721 (-) False AMCG00018113
TU143345 lncRNA upstream 830700 2368430 ~ 2375735 (-) True G114456
AMCG00018089 mRNA downstream 239033 1295566 ~ 1297934 (-) True AMCG00018089
AMCG00018090 mRNA downstream 245137 1272583 ~ 1291830 (-) True AMCG00018090
AMCG00018088 mRNA downstream 288195 1237250 ~ 1248772 (-) True AMCG00018088
AMCG00018087 mRNA downstream 299932 1217293 ~ 1237035 (-) True AMCG00018087
AMCG00018086 mRNA downstream 328426 1207523 ~ 1208541 (-) True AMCG00018086
AMCG00018094 mRNA upstream 89024 1626754 ~ 1627168 (-) True AMCG00018094
AMCG00018095 mRNA upstream 101941 1639671 ~ 1663159 (-) True AMCG00018095
AMCG00018093 mRNA upstream 140104 1677834 ~ 1678345 (-) True AMCG00018093
AMCG00018100 mRNA upstream 202121 1739851 ~ 1745900 (-) True AMCG00018100
AMCG00018098 mRNA upstream 208420 1746150 ~ 1748581 (-) True AMCG00018098
TU142989 other downstream 610228 923507 ~ 926739 (-) False AMCG00018077
TU142990 other downstream 610228 923507 ~ 926739 (-) False AMCG00018077
TU142760 other downstream 1094543 441085 ~ 442424 (-) True G114021
TU143224 other upstream 447419 1985149 ~ 2006636 (-) False AMCG00018113
TU143230 other upstream 469176 2006906 ~ 2067584 (-) False AMCG00018111
TU143313 other upstream 743970 2281700 ~ 2288862 (-) True G114430
TU143456 other upstream 1071415 2609145 ~ 2609479 (-) True G114549
TU143816 other upstream 2523081 4060811 ~ 4064248 (-) False G114838

Expression Profile