Item | Value |
---|---|
RNA id | TU143166 |
length | 453 |
lncRNA type | sense_over |
GC content | 0.51 |
exon number | 3 |
gene id | AMCG00018105 |
representative | False |
Item | Value |
---|---|
chromosome id | CM030135.1 |
NCBI id | CM030135.1 |
chromosome length | 28454832 |
location | 1972838 ~ 1973924 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU143164 | lncRNA | upstream | 2517 | 1969780 ~ 1970409 (+) | True | G114326 |
TU143161 | lncRNA | upstream | 19662 | 1952874 ~ 1953264 (+) | True | G114323 |
TU143160 | lncRNA | upstream | 21327 | 1951215 ~ 1951599 (+) | True | G114322 |
TU143159 | lncRNA | upstream | 22426 | 1950261 ~ 1950500 (+) | True | G114321 |
TU143130 | lncRNA | upstream | 107356 | 1864557 ~ 1865570 (+) | True | G114299 |
TU143178 | lncRNA | downstream | 9968 | 1983651 ~ 1984150 (+) | True | G114332 |
TU143197 | lncRNA | downstream | 33223 | 2006906 ~ 2021630 (+) | True | G114346 |
TU143212 | lncRNA | downstream | 74888 | 2048571 ~ 2050177 (+) | True | G114359 |
TU143296 | lncRNA | downstream | 288993 | 2262676 ~ 2266751 (+) | False | AMCG00018119 |
TU143377 | lncRNA | downstream | 436794 | 2410477 ~ 2412789 (+) | True | G114484 |
AMCG00018102 | mRNA | upstream | 126016 | 1811435 ~ 1846910 (+) | True | AMCG00018102 |
AMCG00018104 | mRNA | upstream | 170698 | 1796402 ~ 1802228 (+) | True | AMCG00018104 |
AMCG00018096 | mRNA | upstream | 193267 | 1770156 ~ 1779659 (+) | True | AMCG00018096 |
AMCG00018097 | mRNA | upstream | 220861 | 1749229 ~ 1752065 (+) | True | AMCG00018097 |
AMCG00018091 | mRNA | upstream | 461554 | 1508994 ~ 1511372 (+) | True | AMCG00018091 |
AMCG00018106 | mRNA | downstream | 6503 | 1980186 ~ 1982566 (+) | True | AMCG00018106 |
AMCG00018115 | mRNA | downstream | 106501 | 2080184 ~ 2095126 (+) | True | AMCG00018115 |
AMCG00018114 | mRNA | downstream | 121872 | 2095555 ~ 2104782 (+) | True | AMCG00018114 |
AMCG00018116 | mRNA | downstream | 142932 | 2116615 ~ 2118790 (+) | True | AMCG00018116 |
AMCG00018121 | mRNA | downstream | 226752 | 2200435 ~ 2203330 (+) | True | AMCG00018121 |
TU143157 | other | upstream | 23333 | 1947841 ~ 1949593 (+) | True | G114320 |
TU143029 | other | upstream | 752710 | 1219779 ~ 1220216 (+) | True | G114219 |
TU142941 | other | upstream | 1093947 | 871345 ~ 878979 (+) | False | AMCG00018072 |
TU142895 | other | upstream | 1178136 | 777383 ~ 794790 (+) | True | G114123 |
TU142800 | other | upstream | 1393222 | 575260 ~ 579704 (+) | False | G114053 |
TU143170 | other | downstream | 3321 | 1977004 ~ 1978727 (+) | True | G114330 |
TU143173 | other | downstream | 5363 | 1979046 ~ 1980379 (+) | False | AMCG00018106 |
TU143174 | other | downstream | 5363 | 1979046 ~ 1980379 (+) | False | AMCG00018106 |
TU143175 | other | downstream | 5363 | 1979046 ~ 1980379 (+) | False | AMCG00018106 |
TU143176 | other | downstream | 5363 | 1979046 ~ 1980379 (+) | False | AMCG00018106 |