RNA id: AMCG00018133



Basic Information


Item Value
RNA id AMCG00018133
length 189
RNA type mRNA
GC content 0.60
exon number 2
gene id AMCG00018133
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2433398 ~ 2433656 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACGATTGTAGCTTTACTGTCCTCTGGCACCACCTGCTGCATCGAGACACAACTGCGGCCTCCCCTGGTACGGCTGCCCCAGGAGCTGGATATCCCAAAACTGCAGCTCCGCAGGCACCACACCCACAAGTGCCAGTGTGACCCCCCAGTCCCGAGCGGCATAGCGATGCCCGGCTCTGagttttaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU143378 lncRNA upstream 15602 2416807 ~ 2417796 (+) True G114485
TU143377 lncRNA upstream 20609 2410477 ~ 2412789 (+) True G114484
TU143296 lncRNA upstream 166647 2262676 ~ 2266751 (+) False AMCG00018119
TU143212 lncRNA upstream 383221 2048571 ~ 2050177 (+) True G114359
TU143197 lncRNA upstream 411768 2006906 ~ 2021630 (+) True G114346
TU143420 lncRNA downstream 57657 2491313 ~ 2568938 (+) False G114518
TU143435 lncRNA downstream 139981 2573637 ~ 2573867 (+) True G114531
TU143455 lncRNA downstream 175487 2609143 ~ 2609412 (+) True G114548
TU143461 lncRNA downstream 234804 2668460 ~ 2668661 (+) True G114553
TU143463 lncRNA downstream 237251 2670907 ~ 2742686 (+) True G114555
AMCG00018131 mRNA upstream 416 2421265 ~ 2432982 (+) True AMCG00018131
AMCG00018128 mRNA upstream 31989 2393305 ~ 2401409 (+) True AMCG00018128
AMCG00018129 mRNA upstream 41400 2385300 ~ 2391998 (+) True AMCG00018129
AMCG00018126 mRNA upstream 51311 2356277 ~ 2382087 (+) True AMCG00018126
AMCG00018127 mRNA upstream 99367 2328704 ~ 2334031 (+) True AMCG00018127
AMCG00018130 mRNA downstream 800 2434456 ~ 2443528 (+) True AMCG00018130
AMCG00018132 mRNA downstream 16133 2449789 ~ 2464758 (+) True AMCG00018132
AMCG00018138 mRNA downstream 140739 2574395 ~ 2579357 (+) True AMCG00018138
AMCG00018146 mRNA downstream 265172 2698828 ~ 2717437 (+) True AMCG00018146
AMCG00018145 mRNA downstream 283846 2717502 ~ 2747393 (+) True AMCG00018145
TU143173 other upstream 453019 1979046 ~ 1980379 (+) False AMCG00018106
TU143174 other upstream 453019 1979046 ~ 1980379 (+) False AMCG00018106
TU143175 other upstream 453019 1979046 ~ 1980379 (+) False AMCG00018106
TU143176 other upstream 453019 1979046 ~ 1980379 (+) False AMCG00018106
TU143170 other upstream 454671 1977004 ~ 1978727 (+) True G114330
TU143421 other downstream 132428 2566084 ~ 2567535 (+) True G114518
TU143458 other downstream 207190 2640846 ~ 2647774 (+) True G114551
TU143856 other downstream 1758061 4191717 ~ 4193114 (+) False AMCG00018196
TU144009 other downstream 2167834 4601490 ~ 4603989 (+) False AMCG00018216
TU144084 other downstream 2327862 4761518 ~ 4763905 (+) True G115049

Expression Profile