RNA id: AMCG00018163



Basic Information


Item Value
RNA id AMCG00018163
length 193
RNA type mRNA
GC content 0.55
exon number 3
gene id AMCG00018163
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2947434 ~ 2948696 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tGATATATTTGATGCCATGTTCCCGGTCACCCACATCGCAGGAGAGACCGTCATCCAACAAGGCCGCTCCGCCTTGCCCGAGCCTGGCACAGAGATGGGCGACTTCCCGTGCTTTCTCACTTTGCCAAGCGTGTTCACGTACCACACGagTGGATGTTTAGCCACCGACACTGCGATTGTAAAAGGACTTGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU143562 lncRNA upstream 64466 2882432 ~ 2882968 (+) True G114629
TU143550 lncRNA upstream 80197 2864988 ~ 2867237 (+) True G114624
TU143537 lncRNA upstream 101981 2844305 ~ 2845453 (+) True G114613
TU143463 lncRNA upstream 204748 2670907 ~ 2742686 (+) True G114555
TU143461 lncRNA upstream 278773 2668460 ~ 2668661 (+) True G114553
TU143616 lncRNA downstream 153470 3102166 ~ 3103170 (+) True G114674
TU143647 lncRNA downstream 219467 3168163 ~ 3168982 (+) True G114699
TU143648 lncRNA downstream 219467 3168163 ~ 3168826 (+) False G114699
TU143685 lncRNA downstream 288347 3237043 ~ 3237244 (+) True G114731
TU143777 lncRNA downstream 1067382 4016078 ~ 4018982 (+) True G114806
AMCG00018156 mRNA upstream 12679 2925415 ~ 2934755 (+) True AMCG00018156
AMCG00018155 mRNA upstream 32093 2911621 ~ 2915341 (+) True AMCG00018155
AMCG00018148 mRNA upstream 65588 2879568 ~ 2881846 (+) True AMCG00018148
AMCG00018150 mRNA upstream 119664 2814447 ~ 2827770 (+) True AMCG00018150
AMCG00018149 mRNA upstream 153561 2788373 ~ 2793873 (+) True AMCG00018149
AMCG00018158 mRNA downstream 1195 2949891 ~ 2965319 (+) True AMCG00018158
AMCG00018159 mRNA downstream 28039 2976735 ~ 2995555 (+) True AMCG00018159
AMCG00018166 mRNA downstream 156324 3105020 ~ 3122175 (+) True AMCG00018166
AMCG00018164 mRNA downstream 175924 3124620 ~ 3139596 (+) True AMCG00018164
AMCG00018165 mRNA downstream 206326 3155022 ~ 3160029 (+) True AMCG00018165
TU143458 other upstream 299660 2640846 ~ 2647774 (+) True G114551
TU143421 other upstream 379899 2566084 ~ 2567535 (+) True G114518
TU143174 other upstream 967055 1979046 ~ 1980379 (+) False AMCG00018106
TU143856 other downstream 1243021 4191717 ~ 4193114 (+) False AMCG00018196
TU144009 other downstream 1652794 4601490 ~ 4603989 (+) False AMCG00018216
TU144084 other downstream 1812822 4761518 ~ 4763905 (+) True G115049
TU144414 other downstream 3000767 5949463 ~ 5951017 (+) True G115299
TU144781 other downstream 4944931 7893627 ~ 7894449 (+) True G115590

Expression Profile