Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00018257 |
| length | 1268 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 11 |
| gene id | AMCG00018257 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 5591847 ~ 5604149 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| K11366 | USP22_27_51, UBP8; ubiquitin carboxyl-terminal hydrolase 22/27/51 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU144281 | lncRNA | upstream | 246900 | 5344487 ~ 5344947 (+) | True | G115201 |
| TU144260 | lncRNA | upstream | 273922 | 5316453 ~ 5317925 (+) | True | G115188 |
| TU144143 | lncRNA | upstream | 490909 | 5095148 ~ 5100938 (+) | True | G115099 |
| TU144096 | lncRNA | upstream | 777428 | 4814018 ~ 4814419 (+) | True | G115061 |
| TU144007 | lncRNA | upstream | 998002 | 4593460 ~ 4593845 (+) | True | G114985 |
| TU144447 | lncRNA | downstream | 441881 | 6046030 ~ 6046534 (+) | True | G115331 |
| TU144484 | lncRNA | downstream | 553810 | 6157959 ~ 6160488 (+) | False | AMCG00018272 |
| TU144512 | lncRNA | downstream | 921570 | 6525719 ~ 6588409 (+) | True | G115379 |
| TU144557 | lncRNA | downstream | 1014029 | 6618178 ~ 6620097 (+) | True | G115419 |
| TU144586 | lncRNA | downstream | 1049973 | 6654122 ~ 6678353 (+) | True | G115439 |
| AMCG00018255 | mRNA | upstream | 63275 | 5527286 ~ 5528572 (+) | True | AMCG00018255 |
| AMCG00018254 | mRNA | upstream | 199365 | 5381051 ~ 5392482 (+) | True | AMCG00018254 |
| AMCG00018249 | mRNA | upstream | 287394 | 5286386 ~ 5304453 (+) | True | AMCG00018249 |
| AMCG00018241 | mRNA | upstream | 312922 | 5271199 ~ 5278925 (+) | True | AMCG00018241 |
| AMCG00018244 | mRNA | upstream | 358490 | 5227386 ~ 5233357 (+) | True | AMCG00018244 |
| AMCG00018256 | mRNA | downstream | 18896 | 5623045 ~ 5633788 (+) | True | AMCG00018256 |
| AMCG00018259 | mRNA | downstream | 84156 | 5688305 ~ 5738824 (+) | True | AMCG00018259 |
| AMCG00018261 | mRNA | downstream | 143920 | 5748069 ~ 5750422 (+) | True | AMCG00018261 |
| AMCG00018260 | mRNA | downstream | 173627 | 5777776 ~ 5777991 (+) | True | AMCG00018260 |
| AMCG00018266 | mRNA | downstream | 286025 | 5890174 ~ 5904487 (+) | True | AMCG00018266 |
| TU144084 | other | upstream | 827942 | 4761518 ~ 4763905 (+) | True | G115049 |
| TU144009 | other | upstream | 987858 | 4601490 ~ 4603989 (+) | False | AMCG00018216 |
| TU143856 | other | upstream | 1398733 | 4191717 ~ 4193114 (+) | False | AMCG00018196 |
| TU143458 | other | upstream | 2944073 | 2640846 ~ 2647774 (+) | True | G114551 |
| TU143421 | other | upstream | 3024312 | 2566084 ~ 2567535 (+) | True | G114518 |
| TU144414 | other | downstream | 345314 | 5949463 ~ 5951017 (+) | True | G115299 |
| TU144781 | other | downstream | 2289478 | 7893627 ~ 7894449 (+) | True | G115590 |
| TU144853 | other | downstream | 2515629 | 8119778 ~ 8122171 (+) | True | G115648 |
| TU145016 | other | downstream | 3089215 | 8693364 ~ 8694719 (+) | True | G115789 |
| TU145182 | other | downstream | 3595508 | 9199657 ~ 9201586 (+) | False | AMCG00018358 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00008911 | True | 3418 | mRNA | 0.48 | 12 | NC_007123.7 | 1492641 ~ 1526051 (+) |
| grasscarp (Ctenopharyngodon idella) | CI01000047_05185698_05212150.mRNA | True | 1685 | mRNA | 0.49 | 12 | CI01000047 | 5185698 ~ 5212224 (+) |
