RNA id: AMCG00018264


Basic Information

Item Value
RNA id AMCG00018264
length 1472
RNA type mRNA
GC content 0.49
exon number 2
gene id AMCG00018264
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5783076 ~ 5784900 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTGATGACGGGGCGCGGGAGGGGTCAGCTTTGCGCATATAAGCCCCGCAGACTCAGCCTGCAACCCAGACCAGCTCCAGCGCTGCACAGGGATTAATCAGAGCCGGCCAGCTGAGTGCCAGACAGCTCCTTCTCCACAGACAAGCTCGCAAACATGATCAAGAAAATGACACCCTCAGAGAATGAGTTTGACATCCCAGCCAAGAACTGCTACAGGATGGTGATTCTGGGCTCCACCAAAGTTGGCAAAACGGCCATCGTGTCCCGGTTTCTCAGCGGGAGGTTCGATGACCAGTACACCCCGACTATTGAGGACTTTCACAGGAAATTTTACAGCATCAGGGGAGACGTTTATCAACTGGATATTTTAGACACTTCTGGGAATCACCCCTTCCCTGCCATGAGAAGGCTTTCCATCTTAACAGGTGATGTCTTTATCCTGGTCTTCAGTCTGGACAACAAAGACTCGTTCAAGGAGGTCCAGCGCCTGAAGCAGCAGATATTCGAGACCAAATCctgtctgaaaaacaaaaccaaagagaaCATTGACGTGCCGCTGGTCATCTGCGGCAACAAATGCGACCGAGACTTCTACAGAGAGGTGCAGCGAGAAGAAATCGACCAACTCATAGCTGGAGATGACCAGTGCGCCTACTTTGAGATCTCCGCCAAAAGGAACACTAACGTGGACAAGATGTTCCAGACTCTCTTCACCATGGCCAAGCTGCCCCACGAGATGAGCCCCGACCTGCACCGCAAGGTCTCGGTGCAGTACTGCGACATGCTCCACAGGAAATCCatcaaaaacaagaaattgaAAGACGGGGACGCCTATGGGATCGTGGCACCTTTCGCCCGGCGCCCAAGCGTGCACAGTGACTTGATGTACATTAAGGAGAAGGCAATCGGGGGCGGCCAAGCCAAGGACAAAGAGAGATGTGTCATCAGCTAAGgactggacacagacacacaggagaatCCGAGACCAAGGATGTCACAGTTGTGGCGCTGAAGGTTGAAATCCGAGAAAGCTTGCTCTGCTCACCGGGGTTCAGAGATTCAAAGCCCGGCAGAAGGGCACTTTTCTCGGCGTTGAACTGGCCTGGACCGTGGGACTTCAACAGACCTTGAGGCGCAGGTTATGTTTGCAGGACTTTGTtgtacaaaacactttttttgccCATAAGTGTCAGGGCGCTGATGTGATGTGACGTGACCCAAGAGAGATGTCTCTTGAATAACATGCTGTAAAATTGCCTTCATTTGAAATCTACCTTAGTAAAGGGTGAAAGCAAAACTTCAGGGTGGCGTGCAATGCGGAACTATACATTGTTTACAAtttgttataaatgttttataacagAAAACAGCACTTGAATGTTTGTTGCAACGAGAACAAATTTTGCCAACGTTTGTTATTTATTCTTGTATGTGAGtcattttatatatgaaaaaataaaatgcataaaacta

Function

GO: NA

KEGG:

id description
K07843 RASD1; RAS, dexamethasone-induced Ras-related protein 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU144388 lncRNA downstream 29054 5750285 ~ 5754022 (-) False G115279
TU144390 lncRNA downstream 29155 5750092 ~ 5753921 (-) True G115279
TU144387 lncRNA downstream 29155 5750285 ~ 5753921 (-) False G115279
TU144386 lncRNA downstream 33033 5749783 ~ 5750043 (-) True G115278
TU144385 lncRNA downstream 34717 5747458 ~ 5748359 (-) True G115277
TU144448 lncRNA upstream 261130 6046030 ~ 6046618 (-) True G115332
TU144532 lncRNA upstream 432628 6217528 ~ 6219216 (-) True G115395
TU144711 lncRNA upstream 1216902 7001802 ~ 7002005 (-) True G115534
TU144760 lncRNA upstream 1949197 7734097 ~ 7734384 (-) True G115577
TU144762 lncRNA upstream 1957074 7741974 ~ 7742210 (-) True G115579
AMCG00018262 mRNA downstream 37372 5741029 ~ 5745704 (-) True AMCG00018262
AMCG00018258 mRNA downstream 170601 5608590 ~ 5612475 (-) True AMCG00018258
AMCG00018251 mRNA downstream 416323 5360737 ~ 5366753 (-) False AMCG00018251
AMCG00018250 mRNA downstream 428153 5349638 ~ 5354923 (-) True AMCG00018250
AMCG00018252 mRNA downstream 440092 5332241 ~ 5342984 (-) True AMCG00018252
AMCG00018265 mRNA upstream 9617 5794517 ~ 5808843 (-) True AMCG00018265
AMCG00018263 mRNA upstream 96646 5881546 ~ 5886000 (-) True AMCG00018263
AMCG00018274 mRNA upstream 283403 6068303 ~ 6124832 (-) True AMCG00018274
AMCG00018289 mRNA upstream 343813 6128713 ~ 6155791 (-) True AMCG00018289
AMCG00018292 mRNA upstream 373380 6158280 ~ 6182812 (-) True AMCG00018292
TU144300 other downstream 416322 5356846 ~ 5366754 (-) True AMCG00018251
TU144251 other downstream 478647 5300107 ~ 5304429 (-) True G115183
TU144253 other downstream 478688 5300107 ~ 5304388 (-) False G115183
TU144242 other downstream 495203 5286386 ~ 5287873 (-) True G115174
TU144068 other downstream 1131464 4646577 ~ 4651612 (-) False AMCG00018220
TU144435 other upstream 165521 5950421 ~ 5951055 (-) True G115320
TU144568 other upstream 833575 6618475 ~ 6623613 (-) False AMCG00018291
TU144582 other upstream 853442 6638342 ~ 6643272 (-) False AMCG00018291
TU144767 other upstream 1958318 7743218 ~ 7773892 (-) True G115581
TU145207 other upstream 3454912 9239812 ~ 9258202 (-) True AMCG00018364

Expression Profile