Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00018292 |
| length | 1011 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 11 |
| gene id | AMCG00018292 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 6158280 ~ 6182812 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016226 | iron-sulfur cluster assembly | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0017111 | nucleoside-triphosphatase activity | molecular_function |
| GO:0051539 | 4 iron, 4 sulfur cluster binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU144448 | lncRNA | downstream | 111662 | 6046030 ~ 6046618 (-) | True | G115332 |
| TU144388 | lncRNA | downstream | 404258 | 5750285 ~ 5754022 (-) | False | G115279 |
| TU144390 | lncRNA | downstream | 404359 | 5750092 ~ 5753921 (-) | True | G115279 |
| TU144387 | lncRNA | downstream | 404359 | 5750285 ~ 5753921 (-) | False | G115279 |
| TU144386 | lncRNA | downstream | 408237 | 5749783 ~ 5750043 (-) | True | G115278 |
| TU144532 | lncRNA | upstream | 34716 | 6217528 ~ 6219216 (-) | True | G115395 |
| TU144711 | lncRNA | upstream | 818990 | 7001802 ~ 7002005 (-) | True | G115534 |
| TU144760 | lncRNA | upstream | 1551285 | 7734097 ~ 7734384 (-) | True | G115577 |
| TU144762 | lncRNA | upstream | 1559162 | 7741974 ~ 7742210 (-) | True | G115579 |
| TU144763 | lncRNA | upstream | 1559729 | 7742541 ~ 7742747 (-) | True | G115580 |
| AMCG00018289 | mRNA | downstream | 2489 | 6128713 ~ 6155791 (-) | True | AMCG00018289 |
| AMCG00018274 | mRNA | downstream | 33448 | 6068303 ~ 6124832 (-) | True | AMCG00018274 |
| AMCG00018263 | mRNA | downstream | 272280 | 5881546 ~ 5886000 (-) | True | AMCG00018263 |
| AMCG00018265 | mRNA | downstream | 349437 | 5794517 ~ 5808843 (-) | True | AMCG00018265 |
| AMCG00018264 | mRNA | downstream | 373380 | 5783076 ~ 5784900 (-) | True | AMCG00018264 |
| AMCG00018286 | mRNA | upstream | 37161 | 6219973 ~ 6231007 (-) | True | AMCG00018286 |
| AMCG00018293 | mRNA | upstream | 126557 | 6309369 ~ 6464857 (-) | True | AMCG00018293 |
| AMCG00018283 | mRNA | upstream | 402164 | 6584976 ~ 6593102 (-) | True | AMCG00018283 |
| AMCG00018291 | mRNA | upstream | 427821 | 6610633 ~ 6652773 (-) | True | AMCG00018291 |
| AMCG00018284 | mRNA | upstream | 471077 | 6653889 ~ 6675207 (-) | True | AMCG00018284 |
| TU144435 | other | downstream | 207225 | 5950421 ~ 5951055 (-) | True | G115320 |
| TU144300 | other | downstream | 791526 | 5356846 ~ 5366754 (-) | True | AMCG00018251 |
| TU144251 | other | downstream | 853851 | 5300107 ~ 5304429 (-) | True | G115183 |
| TU144253 | other | downstream | 853892 | 5300107 ~ 5304388 (-) | False | G115183 |
| TU144242 | other | downstream | 870407 | 5286386 ~ 5287873 (-) | True | G115174 |
| TU144568 | other | upstream | 435663 | 6618475 ~ 6623613 (-) | False | AMCG00018291 |
| TU144582 | other | upstream | 455530 | 6638342 ~ 6643272 (-) | False | AMCG00018291 |
| TU144767 | other | upstream | 1560406 | 7743218 ~ 7773892 (-) | True | G115581 |
| TU145207 | other | upstream | 3057000 | 9239812 ~ 9258202 (-) | True | AMCG00018364 |
| TU145480 | other | upstream | 3736234 | 9919046 ~ 9924582 (-) | True | G116165 |
