RNA id: AMCG00018324



Basic Information


Item Value
RNA id AMCG00018324
length 645
RNA type mRNA
GC content 0.61
exon number 3
gene id AMCG00018324
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 8350111 ~ 8351371 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTCGGAGGAGAAACGGGTGGCAGCGGTGGCTGCGGGCTTGGGGCAGGGTGCCCGGGTGGACAGCGTGCGCACTGCCATCGGACAGGAGATGACACACATCCGGGATCTCCCGCATTCCCAGCGCTTTGCCCACAAACCCACGCCAGTGAGCTACCGAGGCGGGCGGCCCATGCACCAGAGCACCCTTAGACTGGGGGGCAGGCCCTCGGAGACCAGCTACACCACCACACAGGCACATTACTTTTCAGGCAGAGGCAGCCATGGGCAGTTGTTGCGAGGTGTGCCCCGAGTGCCACAGTACCCATCTCAGCACCATGGCAGACTGGACCTCGGCACCCTGACCCTGGAGCACTGCCAGCCACACAGCCGGGACACCTTCGGGCCCAAAGAGATCACACCGCACTATATTCTGCACGAGTCTGGCGTGAAGAATCGGCATCACAATCAGCACAGCCTGGCCATGAGAGAAATCACCAACCCTTCGGGCGAGCAGAAAGACTACAGAAGCACGTACAGGACAGAGCACTGCAGTGAAACCCTGCCTTCAGCCTCTACCAGCTGCAGAGGGCTGCCCACAGACTGGCACAATTACAACATCATCACAGGTGAGACACACCTGGACACCGTACTGCAGGCACACTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU144888 lncRNA upstream 2275 8294416 ~ 8347836 (+) False G115679
TU144889 lncRNA upstream 2275 8294416 ~ 8347836 (+) False G115679
TU144892 lncRNA upstream 2275 8343130 ~ 8347836 (+) True G115679
TU144843 lncRNA upstream 255662 8094200 ~ 8094449 (+) True G115640
TU144782 lncRNA upstream 451931 7897940 ~ 7898180 (+) True G115591
TU144883 lncRNA downstream 706 8352077 ~ 8372827 (+) True G115678
TU145024 lncRNA downstream 351786 8703157 ~ 8704903 (+) True G115796
TU145109 lncRNA downstream 510710 8862081 ~ 8862511 (+) True G115873
TU145111 lncRNA downstream 517171 8868542 ~ 8870342 (+) True G115875
TU145137 lncRNA downstream 684959 9036330 ~ 9036583 (+) True G115896
AMCG00018325 mRNA upstream 34570 8290001 ~ 8315541 (+) True AMCG00018325
AMCG00018320 mRNA upstream 182361 8154810 ~ 8167750 (+) True AMCG00018320
AMCG00018321 mRNA upstream 199561 8140007 ~ 8150550 (+) True AMCG00018321
AMCG00018318 mRNA upstream 231679 8116069 ~ 8118432 (+) True AMCG00018318
AMCG00018317 mRNA upstream 235921 8097388 ~ 8114190 (+) True AMCG00018317
AMCG00018327 mRNA downstream 48462 8399833 ~ 8404453 (+) True AMCG00018327
AMCG00018332 mRNA downstream 135195 8486566 ~ 8514892 (+) True AMCG00018332
AMCG00018333 mRNA downstream 190620 8541991 ~ 8543115 (+) True AMCG00018333
AMCG00018336 mRNA downstream 202217 8553588 ~ 8592721 (+) True AMCG00018336
AMCG00018335 mRNA downstream 253350 8604721 ~ 8623654 (+) True AMCG00018335
TU144853 other upstream 227940 8119778 ~ 8122171 (+) True G115648
TU144781 other upstream 455662 7893627 ~ 7894449 (+) True G115590
TU144414 other upstream 2399094 5949463 ~ 5951017 (+) True G115299
TU144084 other upstream 3586206 4761518 ~ 4763905 (+) True G115049
TU144009 other upstream 3746122 4601490 ~ 4603989 (+) False AMCG00018216
TU145016 other downstream 341993 8693364 ~ 8694719 (+) True G115789
TU145182 other downstream 848286 9199657 ~ 9201586 (+) False AMCG00018358
TU145192 other downstream 888440 9239811 ~ 9241815 (+) True AMCG00018360
TU145295 other downstream 1210790 9562161 ~ 9564404 (+) False AMCG00018372
TU145312 other downstream 1257706 9609077 ~ 9612918 (+) False AMCG00018380

Expression Profile