RNA id: AMCG00018357



Basic Information


Item Value
RNA id AMCG00018357
length 273
RNA type mRNA
GC content 0.63
exon number 1
gene id AMCG00018357
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 9156181 ~ 9156453 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGATCCCCAGCAGCTTCAGCTGGGACCACAGGGGGAAGTCGGGATGGTGGGCTTACTGGTCCCCAGTCCGCAGAGCGAGGCGGTGACCCACGAGCTAGAGGAGCTGTCGCTGCAGCCCAGCCAGAACCTGCCGCCCCTCAACGAGCGCAAGAACGGTGAGTACCAACCCAGCAGCCTGGACTCCCCGCCCTCGCAGAGAGACCTCGCCCACTGCAGATATCCAGGGCTCCGTTGCACCAGACCAGGTCCACAGTGGAAGAAAAATGTGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU145137 lncRNA upstream 119598 9036330 ~ 9036583 (+) True G115896
TU145111 lncRNA upstream 285839 8868542 ~ 8870342 (+) True G115875
TU145109 lncRNA upstream 293670 8862081 ~ 8862511 (+) True G115873
TU145024 lncRNA upstream 451278 8703157 ~ 8704903 (+) True G115796
TU144883 lncRNA upstream 783354 8352077 ~ 8372827 (+) True G115678
TU145180 lncRNA downstream 42424 9198877 ~ 9199440 (+) True G115931
TU145190 lncRNA downstream 71557 9228010 ~ 9230141 (+) True G115939
TU145254 lncRNA downstream 280579 9437032 ~ 9437303 (+) True G115990
TU145252 lncRNA downstream 289157 9445610 ~ 9447020 (+) False AMCG00018368
TU145266 lncRNA downstream 316044 9472497 ~ 9477108 (+) True G116002
AMCG00018356 mRNA upstream 26061 9124313 ~ 9130120 (+) True AMCG00018356
AMCG00018354 mRNA upstream 134283 9020003 ~ 9021898 (+) True AMCG00018354
AMCG00018351 mRNA upstream 214545 8937615 ~ 8941636 (+) True AMCG00018351
AMCG00018350 mRNA upstream 218579 8932090 ~ 8937602 (+) True AMCG00018350
AMCG00018348 mRNA upstream 308997 8813019 ~ 8847184 (+) True AMCG00018348
AMCG00018355 mRNA downstream 6033 9162486 ~ 9187759 (+) True AMCG00018355
AMCG00018358 mRNA downstream 43259 9199712 ~ 9206776 (+) True AMCG00018358
AMCG00018360 mRNA downstream 84909 9241362 ~ 9245234 (+) False AMCG00018360
AMCG00018359 mRNA downstream 103001 9259454 ~ 9285418 (+) True AMCG00018359
AMCG00018366 mRNA downstream 134879 9291332 ~ 9295905 (+) True AMCG00018366
TU145016 other upstream 461462 8693364 ~ 8694719 (+) True G115789
TU144853 other upstream 1034010 8119778 ~ 8122171 (+) True G115648
TU144781 other upstream 1261732 7893627 ~ 7894449 (+) True G115590
TU144414 other upstream 3205164 5949463 ~ 5951017 (+) True G115299
TU144084 other upstream 4392276 4761518 ~ 4763905 (+) True G115049
TU145182 other downstream 43204 9199657 ~ 9201586 (+) False AMCG00018358
TU145192 other downstream 83358 9239811 ~ 9241815 (+) True AMCG00018360
TU145295 other downstream 405708 9562161 ~ 9564404 (+) False AMCG00018372
TU145312 other downstream 452624 9609077 ~ 9612918 (+) False AMCG00018380
TU146017 other downstream 2809794 11966247 ~ 11970778 (+) True G116585

Expression Profile