RNA id: AMCG00018428


Basic Information

Item Value
RNA id AMCG00018428
length 261
RNA type mRNA
GC content 0.52
exon number 4
gene id AMCG00018428
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 10377293 ~ 10384857 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCCAGAGACCCAGAAGAAGTGAACAAGCTCACTGAAAGTACATACAAGAATGTTATGGAACAGTTCAACCCCGGGCTGCGAAACCTCGTCAACCTGGGGAAGAGCTatgaaaaagcagcagcagCCATGACTCTTGCGGGAAGGGCCTACTTTGATGCCGTTTCCAAGATAGGAGAGAACGCTGCAGTGTCACCAGTTTCCAGAGAGTTAGTCCACTGGCCTGAGTCTCACTGGCCCAGCCCTCGCTCCCACAGATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU145599 lncRNA downstream 207671 10169248 ~ 10169622 (-) True G116256
TU145598 lncRNA downstream 213771 10163278 ~ 10163522 (-) True G116255
TU145572 lncRNA downstream 232694 10143425 ~ 10144599 (-) True G116236
TU145444 lncRNA downstream 588714 9784430 ~ 9788579 (-) True G116136
TU145440 lncRNA downstream 599944 9774306 ~ 9777349 (-) True AMCG00018390
TU145719 lncRNA upstream 224161 10609018 ~ 10671019 (-) True G116352
TU145723 lncRNA upstream 353694 10738551 ~ 10739008 (-) True G116355
TU145734 lncRNA upstream 586023 10970880 ~ 10971087 (-) True G116365
TU145736 lncRNA upstream 588238 10973095 ~ 10973307 (-) True G116367
TU145737 lncRNA upstream 592365 10977222 ~ 10979678 (-) True G116368
AMCG00018427 mRNA downstream 11038 10342142 ~ 10366255 (-) True AMCG00018427
AMCG00018424 mRNA downstream 44311 10303054 ~ 10332982 (-) True AMCG00018424
AMCG00018420 mRNA downstream 146092 10223672 ~ 10231201 (-) True AMCG00018420
AMCG00018419 mRNA downstream 158805 10202779 ~ 10218488 (-) True AMCG00018419
AMCG00018421 mRNA downstream 178888 10196209 ~ 10198405 (-) True AMCG00018421
AMCG00018430 mRNA upstream 100316 10485173 ~ 10492963 (-) True AMCG00018430
AMCG00018431 mRNA upstream 177697 10562554 ~ 10580105 (-) True AMCG00018431
AMCG00018437 mRNA upstream 676771 11061628 ~ 11083780 (-) True AMCG00018437
AMCG00018440 mRNA upstream 703584 11088441 ~ 11090570 (-) False AMCG00018440
AMCG00018439 mRNA upstream 706439 11091296 ~ 11118823 (-) True AMCG00018439
TU145667 other downstream 35204 10335201 ~ 10342089 (-) True G116306
TU145658 other downstream 68098 10307590 ~ 10309195 (-) False AMCG00018424
TU145571 other downstream 240524 10129560 ~ 10136769 (-) False AMCG00018416
TU145480 other downstream 452711 9919046 ~ 9924582 (-) True G116165
TU145207 other downstream 1119091 9239812 ~ 9258202 (-) True AMCG00018364
TU145708 other upstream 180938 10565795 ~ 10572002 (-) False AMCG00018431
TU145777 other upstream 676798 11061655 ~ 11068318 (-) False AMCG00018437
TU145811 other upstream 814721 11199578 ~ 11202888 (-) True G116428
TU146006 other upstream 1526157 11911014 ~ 11911336 (-) True G116577
TU146385 other upstream 2868228 13253085 ~ 13255769 (-) False AMCG00018522