RNA id: AMCG00018440


Basic Information

Item Value
RNA id AMCG00018440
length 186
RNA type mRNA
GC content 0.42
exon number 2
gene id AMCG00018440
representative False

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 11088174 ~ 11146940 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCGTCCGTCCCCCCCTTGGCAGTTACTGTGCCGGCTTGGACTGGTTGcgtttgatttttattattttttgttttgtgtgtgtgtgtgtgcttctaATATAGCAGGTGCAGAGGTGTTCGGTGTAAATGATCTGAAAACAACCCaagccaacaacaacaaaaaacaaattggaaatGGATTACAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU145737 lncRNA downstream 108763 10977222 ~ 10979678 (-) True G116368
TU145736 lncRNA downstream 115134 10973095 ~ 10973307 (-) True G116367
TU145734 lncRNA downstream 117354 10970880 ~ 10971087 (-) True G116365
TU145723 lncRNA downstream 349433 10738551 ~ 10739008 (-) True G116355
TU145719 lncRNA downstream 417422 10609018 ~ 10671019 (-) True G116352
TU145812 lncRNA upstream 109008 11199578 ~ 11202888 (-) False G116428
TU145841 lncRNA upstream 161789 11252359 ~ 11253565 (-) True G116446
TU145849 lncRNA upstream 189796 11280366 ~ 11353097 (-) True G116454
TU145912 lncRNA upstream 420893 11511463 ~ 11514493 (-) True G116501
TU145923 lncRNA upstream 441228 11531798 ~ 11532070 (-) True G116511
AMCG00018437 mRNA downstream 4661 11061628 ~ 11083780 (-) True AMCG00018437
AMCG00018431 mRNA downstream 508336 10562554 ~ 10580105 (-) True AMCG00018431
AMCG00018430 mRNA downstream 595478 10485173 ~ 10492963 (-) True AMCG00018430
AMCG00018428 mRNA downstream 703584 10377293 ~ 10384857 (-) True AMCG00018428
AMCG00018427 mRNA downstream 722186 10342142 ~ 10366255 (-) True AMCG00018427
AMCG00018439 mRNA upstream 726 11091296 ~ 11118823 (-) True AMCG00018439
AMCG00018438 mRNA upstream 49519 11140089 ~ 11142854 (-) True AMCG00018438
AMCG00018447 mRNA upstream 83285 11173855 ~ 11196168 (-) True AMCG00018447
AMCG00018448 mRNA upstream 116172 11206742 ~ 11209424 (-) True AMCG00018448
AMCG00018446 mRNA upstream 131259 11221829 ~ 11236984 (-) True AMCG00018446
TU145777 other downstream 20123 11061655 ~ 11068318 (-) False AMCG00018437
TU145708 other downstream 516439 10565795 ~ 10572002 (-) False AMCG00018431
TU145668 other downstream 703225 10360129 ~ 10385216 (-) True G116307
TU145667 other downstream 746352 10335201 ~ 10342089 (-) True G116306
TU145658 other downstream 779246 10307590 ~ 10309195 (-) False AMCG00018424
TU145811 other upstream 109008 11199578 ~ 11202888 (-) True G116428
TU146006 other upstream 820444 11911014 ~ 11911336 (-) True G116577
TU146385 other upstream 2162515 13253085 ~ 13255769 (-) False AMCG00018522
TU146918 other upstream 3412833 14503403 ~ 14520875 (-) True G117267
TU147067 other upstream 3645568 14736138 ~ 14738312 (-) True G117377

Expression Profile