Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00018538 |
| length | 1307 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 3 |
| gene id | AMCG00018538 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 14141377 ~ 14145995 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007017 | microtubule-based process | biological_process |
| GO:0005875 | microtubule associated complex | cellular_component |
| id | description |
|---|---|
| K10418 | DYNLL; dynein light chain LC8-type |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU146591 | lncRNA | upstream | 120362 | 14020643 ~ 14022806 (+) | False | AMCG00018537 |
| TU146533 | lncRNA | upstream | 296076 | 13846890 ~ 13847092 (+) | True | G116976 |
| TU146532 | lncRNA | upstream | 303197 | 13839716 ~ 13839971 (+) | True | G116975 |
| TU146490 | lncRNA | upstream | 451801 | 13666023 ~ 13691367 (+) | True | G116941 |
| TU146409 | lncRNA | upstream | 776140 | 13366640 ~ 13367028 (+) | True | G116882 |
| TU146732 | lncRNA | downstream | 96122 | 14242117 ~ 14242717 (+) | False | AMCG00018551 |
| TU146733 | lncRNA | downstream | 96869 | 14242864 ~ 14244203 (+) | True | G117130 |
| TU146734 | lncRNA | downstream | 98713 | 14244708 ~ 14245318 (+) | True | G117131 |
| TU146778 | lncRNA | downstream | 184846 | 14330841 ~ 14399539 (+) | True | AMCG00018564 |
| TU146746 | lncRNA | downstream | 263136 | 14409131 ~ 14412255 (+) | False | AMCG00018567 |
| AMCG00018547 | mRNA | upstream | 31258 | 14111704 ~ 14111910 (+) | True | AMCG00018547 |
| AMCG00018537 | mRNA | upstream | 121102 | 13997909 ~ 14022066 (+) | True | AMCG00018537 |
| AMCG00018536 | mRNA | upstream | 157567 | 13972550 ~ 13985601 (+) | True | AMCG00018536 |
| AMCG00018533 | mRNA | upstream | 182180 | 13941628 ~ 13960988 (+) | True | AMCG00018533 |
| AMCG00018534 | mRNA | upstream | 240507 | 13885780 ~ 13902661 (+) | True | AMCG00018534 |
| AMCG00018539 | mRNA | downstream | 13668 | 14159663 ~ 14161738 (+) | True | AMCG00018539 |
| AMCG00018553 | mRNA | downstream | 43947 | 14189942 ~ 14191067 (+) | False | AMCG00018553 |
| AMCG00018549 | mRNA | downstream | 46143 | 14192138 ~ 14200344 (+) | True | AMCG00018549 |
| AMCG00018552 | mRNA | downstream | 84995 | 14230990 ~ 14232314 (+) | True | AMCG00018552 |
| AMCG00018550 | mRNA | downstream | 86727 | 14232722 ~ 14237949 (+) | True | AMCG00018550 |
| TU146602 | other | upstream | 94015 | 14046259 ~ 14049153 (+) | True | G117033 |
| TU146594 | other | upstream | 120362 | 14019928 ~ 14022806 (+) | False | AMCG00018537 |
| TU146394 | other | upstream | 814896 | 13307898 ~ 13328272 (+) | False | AMCG00018520 |
| TU146344 | other | upstream | 887374 | 13253343 ~ 13255794 (+) | True | G116832 |
| TU146176 | other | upstream | 1623287 | 12515803 ~ 12519881 (+) | True | AMCG00018491 |
| TU146688 | other | downstream | 43008 | 14189003 ~ 14191077 (+) | True | AMCG00018553 |
| TU146730 | other | downstream | 93503 | 14239498 ~ 14242037 (+) | False | AMCG00018551 |
| TU146792 | other | downstream | 199095 | 14345090 ~ 14347741 (+) | True | G117178 |
| TU147075 | other | downstream | 629794 | 14775789 ~ 14776494 (+) | False | G117379 |
| TU147084 | other | downstream | 640628 | 14786623 ~ 14788133 (+) | True | G117383 |
