Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00018552 |
| length | 765 |
| RNA type | mRNA |
| GC content | 0.59 |
| exon number | 3 |
| gene id | AMCG00018552 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 14230990 ~ 14232314 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:1902600 | proton transmembrane transport | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005751 | mitochondrial respiratory chain complex IV | cellular_component |
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| id | description |
|---|---|
| K02266 | COX6A; cytochrome c oxidase subunit 6a |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU146591 | lncRNA | upstream | 208184 | 14020643 ~ 14022806 (+) | False | AMCG00018537 |
| TU146533 | lncRNA | upstream | 383898 | 13846890 ~ 13847092 (+) | True | G116976 |
| TU146532 | lncRNA | upstream | 391019 | 13839716 ~ 13839971 (+) | True | G116975 |
| TU146490 | lncRNA | upstream | 539623 | 13666023 ~ 13691367 (+) | True | G116941 |
| TU146409 | lncRNA | upstream | 863962 | 13366640 ~ 13367028 (+) | True | G116882 |
| TU146732 | lncRNA | downstream | 9803 | 14242117 ~ 14242717 (+) | False | AMCG00018551 |
| TU146733 | lncRNA | downstream | 10550 | 14242864 ~ 14244203 (+) | True | G117130 |
| TU146734 | lncRNA | downstream | 12394 | 14244708 ~ 14245318 (+) | True | G117131 |
| TU146778 | lncRNA | downstream | 98527 | 14330841 ~ 14399539 (+) | True | AMCG00018564 |
| TU146746 | lncRNA | downstream | 176817 | 14409131 ~ 14412255 (+) | False | AMCG00018567 |
| AMCG00018549 | mRNA | upstream | 30646 | 14192138 ~ 14200344 (+) | True | AMCG00018549 |
| AMCG00018553 | mRNA | upstream | 39923 | 14189942 ~ 14191067 (+) | False | AMCG00018553 |
| AMCG00018539 | mRNA | upstream | 69252 | 14159663 ~ 14161738 (+) | True | AMCG00018539 |
| AMCG00018538 | mRNA | upstream | 84995 | 14143168 ~ 14145995 (+) | True | AMCG00018538 |
| AMCG00018547 | mRNA | upstream | 119080 | 14111704 ~ 14111910 (+) | True | AMCG00018547 |
| AMCG00018550 | mRNA | downstream | 408 | 14232722 ~ 14237949 (+) | True | AMCG00018550 |
| AMCG00018551 | mRNA | downstream | 6928 | 14239242 ~ 14242265 (+) | True | AMCG00018551 |
| AMCG00018558 | mRNA | downstream | 128722 | 14361036 ~ 14367961 (+) | True | AMCG00018558 |
| AMCG00018568 | mRNA | downstream | 156712 | 14389026 ~ 14389346 (+) | True | AMCG00018568 |
| AMCG00018570 | mRNA | downstream | 159995 | 14392309 ~ 14393844 (+) | True | AMCG00018570 |
| TU146688 | other | upstream | 39913 | 14189003 ~ 14191077 (+) | True | AMCG00018553 |
| TU146633 | other | upstream | 85412 | 14141377 ~ 14145578 (+) | False | AMCG00018538 |
| TU146602 | other | upstream | 181837 | 14046259 ~ 14049153 (+) | True | G117033 |
| TU146594 | other | upstream | 208184 | 14019928 ~ 14022806 (+) | False | AMCG00018537 |
| TU146394 | other | upstream | 902718 | 13307898 ~ 13328272 (+) | False | AMCG00018520 |
| TU146730 | other | downstream | 7184 | 14239498 ~ 14242037 (+) | False | AMCG00018551 |
| TU146792 | other | downstream | 112776 | 14345090 ~ 14347741 (+) | True | G117178 |
| TU147075 | other | downstream | 543475 | 14775789 ~ 14776494 (+) | False | G117379 |
| TU147084 | other | downstream | 554309 | 14786623 ~ 14788133 (+) | True | G117383 |
| TU147178 | other | downstream | 722250 | 14954564 ~ 14956580 (+) | False | AMCG00018602 |
