RNA id: AMCG00018566



Basic Information


Item Value
RNA id AMCG00018566
length 516
RNA type mRNA
GC content 0.62
exon number 3
gene id AMCG00018566
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14445220 ~ 14446081 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACCGGTACGCGGATCTCCGTCCAGCTGCCCCCCAACATCGACCCCACCAAGGCTCCAGTGGCGTTTGGGGACCGGGCGGTGCCCAGGCTGTCCCGGGAGTTGCGCAGCGCGGAGCTGTTGACCCGCCAGCGGGCCCTGATGTCGCTGTGCTGTCTAGAGAGTCTGAAGCTGCTGCTGTGTGACGAGGACAGCACTGTGCGGCTGAAGACCACAGAGTTGCTGTACCTGCTGGCCAATCACAACAGTGGCAGGGAGGCGCTCCTGAGCAGTGATGTCATCTCTCCGCTGTCTGACCTCCTGGAGGAGCCGCTGGAGGCGTGTCGCTGGAACACCCACAGGGTGCTGCAGGCGCTGGCCGAGCTCCCCCCAGGTAAGCAGAAGCTGCCCCACATACCTGGATACACCTGCACCACACCTCTGCACGAATACCTGGGCACCTGCAGCGCACACCTGGAGAAATCTGCATCACAACTGGAGAACAGCTGCATTAAACAGCCTAACTTCACAGAGTGA

Function


GO: NA

KEGG:

id description
ko03030 DNA replication

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU146814 lncRNA upstream 6129 14437992 ~ 14439091 (+) True G117197
TU146746 lncRNA upstream 32965 14409131 ~ 14412255 (+) False AMCG00018567
TU146778 lncRNA upstream 45681 14330841 ~ 14399539 (+) True AMCG00018564
TU146734 lncRNA upstream 199902 14244708 ~ 14245318 (+) True G117131
TU146733 lncRNA upstream 201017 14242864 ~ 14244203 (+) True G117130
TU146834 lncRNA downstream 87882 14533963 ~ 14534200 (+) True G117209
TU147042 lncRNA downstream 290015 14736096 ~ 14738327 (+) True G117353
TU147070 lncRNA downstream 328034 14774115 ~ 14775240 (+) False G117379
TU147072 lncRNA downstream 328034 14774115 ~ 14775240 (+) False G117379
TU147073 lncRNA downstream 328034 14774115 ~ 14775240 (+) False G117379
AMCG00018565 mRNA upstream 13594 14420275 ~ 14431626 (+) True AMCG00018565
AMCG00018567 mRNA upstream 32941 14408958 ~ 14412279 (+) True AMCG00018567
AMCG00018569 mRNA upstream 38242 14404406 ~ 14406978 (+) True AMCG00018569
AMCG00018564 mRNA upstream 46105 14395003 ~ 14399115 (+) False AMCG00018564
AMCG00018570 mRNA upstream 51376 14392309 ~ 14393844 (+) True AMCG00018570
AMCG00018580 mRNA downstream 30837 14476918 ~ 14478333 (+) True AMCG00018580
AMCG00018579 mRNA downstream 32999 14479080 ~ 14495801 (+) True AMCG00018579
AMCG00018578 mRNA downstream 52518 14498599 ~ 14504059 (+) True AMCG00018578
AMCG00018576 mRNA downstream 65157 14511238 ~ 14519019 (+) True AMCG00018576
AMCG00018575 mRNA downstream 73771 14519852 ~ 14529437 (+) True AMCG00018575
TU146792 other upstream 97479 14345090 ~ 14347741 (+) True G117178
TU146730 other upstream 203183 14239498 ~ 14242037 (+) False AMCG00018551
TU146688 other upstream 254143 14189003 ~ 14191077 (+) True AMCG00018553
TU146633 other upstream 299642 14141377 ~ 14145578 (+) False AMCG00018538
TU146602 other upstream 396067 14046259 ~ 14049153 (+) True G117033
TU147075 other downstream 329708 14775789 ~ 14776494 (+) False G117379
TU147084 other downstream 340542 14786623 ~ 14788133 (+) True G117383
TU147178 other downstream 508483 14954564 ~ 14956580 (+) False AMCG00018602
TU147595 other downstream 2622131 17068212 ~ 17069670 (+) True G117786
TU147848 other downstream 3535129 17981210 ~ 17982114 (+) False AMCG00018681

Expression Profile