Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00018569 |
| length | 1040 |
| RNA type | mRNA |
| GC content | 0.61 |
| exon number | 5 |
| gene id | AMCG00018569 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 14404406 ~ 14406978 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0015031 | protein transport | biological_process |
| GO:0070121 | Kupffer's vesicle development | biological_process |
| GO:0060271 | cilium assembly | biological_process |
| GO:0007399 | nervous system development | biological_process |
| GO:0005929 | cilium | cellular_component |
| GO:0008289 | lipid binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU146778 | lncRNA | upstream | 4867 | 14330841 ~ 14399539 (+) | True | AMCG00018564 |
| TU146734 | lncRNA | upstream | 159088 | 14244708 ~ 14245318 (+) | True | G117131 |
| TU146733 | lncRNA | upstream | 160203 | 14242864 ~ 14244203 (+) | True | G117130 |
| TU146732 | lncRNA | upstream | 161689 | 14242117 ~ 14242717 (+) | False | AMCG00018551 |
| TU146591 | lncRNA | upstream | 381600 | 14020643 ~ 14022806 (+) | False | AMCG00018537 |
| TU146746 | lncRNA | downstream | 2153 | 14409131 ~ 14412255 (+) | False | AMCG00018567 |
| TU146814 | lncRNA | downstream | 31014 | 14437992 ~ 14439091 (+) | True | G117197 |
| TU146834 | lncRNA | downstream | 126985 | 14533963 ~ 14534200 (+) | True | G117209 |
| TU147042 | lncRNA | downstream | 329118 | 14736096 ~ 14738327 (+) | True | G117353 |
| TU147070 | lncRNA | downstream | 367137 | 14774115 ~ 14775240 (+) | False | G117379 |
| AMCG00018564 | mRNA | upstream | 5291 | 14395003 ~ 14399115 (+) | False | AMCG00018564 |
| AMCG00018570 | mRNA | upstream | 10562 | 14392309 ~ 14393844 (+) | True | AMCG00018570 |
| AMCG00018568 | mRNA | upstream | 15060 | 14389026 ~ 14389346 (+) | True | AMCG00018568 |
| AMCG00018558 | mRNA | upstream | 36445 | 14361036 ~ 14367961 (+) | True | AMCG00018558 |
| AMCG00018551 | mRNA | upstream | 162141 | 14239242 ~ 14242265 (+) | True | AMCG00018551 |
| AMCG00018567 | mRNA | downstream | 1980 | 14408958 ~ 14412279 (+) | True | AMCG00018567 |
| AMCG00018565 | mRNA | downstream | 13297 | 14420275 ~ 14431626 (+) | True | AMCG00018565 |
| AMCG00018566 | mRNA | downstream | 38242 | 14445220 ~ 14446081 (+) | True | AMCG00018566 |
| AMCG00018580 | mRNA | downstream | 69940 | 14476918 ~ 14478333 (+) | True | AMCG00018580 |
| AMCG00018579 | mRNA | downstream | 72102 | 14479080 ~ 14495801 (+) | True | AMCG00018579 |
| TU146792 | other | upstream | 56665 | 14345090 ~ 14347741 (+) | True | G117178 |
| TU146730 | other | upstream | 162369 | 14239498 ~ 14242037 (+) | False | AMCG00018551 |
| TU146688 | other | upstream | 213329 | 14189003 ~ 14191077 (+) | True | AMCG00018553 |
| TU146633 | other | upstream | 258828 | 14141377 ~ 14145578 (+) | False | AMCG00018538 |
| TU146602 | other | upstream | 355253 | 14046259 ~ 14049153 (+) | True | G117033 |
| TU147075 | other | downstream | 368811 | 14775789 ~ 14776494 (+) | False | G117379 |
| TU147084 | other | downstream | 379645 | 14786623 ~ 14788133 (+) | True | G117383 |
| TU147178 | other | downstream | 547586 | 14954564 ~ 14956580 (+) | False | AMCG00018602 |
| TU147595 | other | downstream | 2661234 | 17068212 ~ 17069670 (+) | True | G117786 |
| TU147848 | other | downstream | 3574232 | 17981210 ~ 17982114 (+) | False | AMCG00018681 |
