Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00018724 |
| length | 810 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 3 |
| gene id | AMCG00018724 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 19153458 ~ 19154597 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016491 | oxidoreductase activity | molecular_function |
| id | description |
|---|---|
| K10859 | ALKBH2; DNA oxidative demethylase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU148059 | lncRNA | upstream | 244502 | 18906406 ~ 18908956 (+) | False | AMCG00018717 |
| TU148025 | lncRNA | upstream | 321215 | 18827597 ~ 18832243 (+) | True | AMCG00018712 |
| TU147886 | lncRNA | upstream | 422646 | 18466368 ~ 18730812 (+) | True | G118013 |
| TU147918 | lncRNA | upstream | 477232 | 18674274 ~ 18676226 (+) | True | G118043 |
| TU147877 | lncRNA | upstream | 935359 | 18217803 ~ 18218099 (+) | True | G118005 |
| TU148164 | lncRNA | downstream | 68777 | 19223374 ~ 19227433 (+) | True | AMCG00018732 |
| TU148221 | lncRNA | downstream | 301545 | 19456142 ~ 19456983 (+) | True | G118285 |
| TU148226 | lncRNA | downstream | 313226 | 19467823 ~ 19473460 (+) | True | G118290 |
| TU148227 | lncRNA | downstream | 325094 | 19479691 ~ 19479956 (+) | True | G118291 |
| TU148240 | lncRNA | downstream | 422367 | 19576964 ~ 19579031 (+) | True | G118304 |
| AMCG00018725 | mRNA | upstream | 37193 | 19108376 ~ 19116265 (+) | True | AMCG00018725 |
| AMCG00018719 | mRNA | upstream | 74681 | 19073104 ~ 19078777 (+) | True | AMCG00018719 |
| AMCG00018720 | mRNA | upstream | 102819 | 19047788 ~ 19050639 (+) | True | AMCG00018720 |
| AMCG00018717 | mRNA | upstream | 244527 | 18894335 ~ 18908931 (+) | True | AMCG00018717 |
| AMCG00018716 | mRNA | upstream | 267479 | 18876770 ~ 18885979 (+) | True | AMCG00018716 |
| AMCG00018730 | mRNA | downstream | 11289 | 19165886 ~ 19181728 (+) | True | AMCG00018730 |
| AMCG00018731 | mRNA | downstream | 51458 | 19206055 ~ 19222946 (+) | True | AMCG00018731 |
| AMCG00018732 | mRNA | downstream | 68571 | 19223168 ~ 19234351 (+) | False | AMCG00018732 |
| AMCG00018737 | mRNA | downstream | 120312 | 19274909 ~ 19282966 (+) | True | AMCG00018737 |
| AMCG00018734 | mRNA | downstream | 134592 | 19289189 ~ 19296001 (+) | True | AMCG00018734 |
| TU147936 | other | upstream | 432115 | 18719206 ~ 18721343 (+) | True | AMCG00018702 |
| TU147849 | other | upstream | 1171155 | 17981210 ~ 17982303 (+) | False | AMCG00018681 |
| TU147848 | other | upstream | 1171344 | 17981210 ~ 17982114 (+) | False | AMCG00018681 |
| TU147595 | other | upstream | 2083788 | 17068212 ~ 17069670 (+) | True | G117786 |
| TU147178 | other | upstream | 4196878 | 14954564 ~ 14956580 (+) | False | AMCG00018602 |
| TU148213 | other | downstream | 294029 | 19448626 ~ 19450628 (+) | False | AMCG00018740 |
| TU148369 | other | downstream | 816542 | 19971139 ~ 19974730 (+) | True | AMCG00018762 |
| TU148559 | other | downstream | 1104780 | 20259377 ~ 20260940 (+) | True | G118557 |
| TU148611 | other | downstream | 1219399 | 20373996 ~ 20374812 (+) | False | AMCG00018781 |
| TU148644 | other | downstream | 1359563 | 20514160 ~ 20514491 (+) | True | G118623 |
