RNA id: AMCG00018755


Basic Information

Item Value
RNA id AMCG00018755
length 3554
RNA type mRNA
GC content 0.43
exon number 13
gene id AMCG00018755
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 19778769 ~ 19792342 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AACTGCAAATGTTGAATGTCTGCCTCAACATTAAGTGAGAGAGTTTTGAGGCGTGTTTCCTAAATCAGGAAATCAGAAGCAATTTTTCAATGCAAAACCCAAAGTCAGAAATTCTGTAGATCTATCAGGATTTCAGCTGTACTTGAGGTAAAGTTGCTTGTACTGTGGTCGTTGTGTCCCACTAAGAAACATTGATTCTTCAAGTAGATATCAATGACAGAGCCAGACTCCAGGGAAAGCTGAGTCCTTATTTCACAGTCTGCAGAAAAATGATCAGAAAGACAATCATCGTTGGCTTGGTGGTTCTGCTACTGGCTGCAGTCGCTGTCTTCCTTGGCATATTCTACGCGCTGGACTTACGGAACCCTTCAAGCCCTTCAACTGACAACTACTACTCTAAAGCCGCGGTGGCTGCTGATGCTGGGAAATGCTCTGAGATCGGGAGGGACATCTTGAAAAAGAATGGCTCTGCAGTGGATGCCTCCATCGCAGCATTACTGTGTGTGGGCCTGATGAATTCTCACAGCATGGGCATTGGAGGGGGGCTCTTCCTAACTATATACAACGCCTCCACAGGAAAAGTAGTAACTATCAATGGGAGGGAGACGGCACCTGCTGCTGCCACCGAAGACATGTTTGGCAATAGCACACAATTGTCCCGCACAGGTGTGCTGTCTATAGCTATTCCAGGAGAAATACGAGGCTATGAGATGGCACACCAGCACTACGGCAGGTTACCGTGGAAAGAGCTGTTTTTACCCAGCATTGAACTGGCACGCAAGGGGTTCCCAGTGGGCAAACCTCTGGCAAACGCCATCAGCAGTAACAAGAAAACCATCGAAGAGGACGAAGCTTTATGTGAAGTATTTTGTAACTCCCAGAAAAGGATCCTGAAGGAAAATGATATTATTAAATTTCTCAAACTAGCTGACACCTACCAAAAAATAGCTGATGAAGGCCCTGACGTATTTTACAATGGATCTGTGGCAAAGGACTTTGTAAAGGACATCCAAGAAGCTGGGGGGATCATAACTTTGGAGGATCTGCAAAACTACACCGCTGAACTGGACGAGAACCCATTAAAGATCAATATCGGAGACTACTCAATGTATGTCCCGGATGCTCCCTCCAGTGGCCCAGTGCTTGGGCTCATACTAAACATATTAGATGGGTATAACTTCACCAATGCAAGTGTTTCTACCTCAGAGAAGAAAACCCTCACATATCACCGCATTTTGGAAGCCTTCCGGTTTGCCTATGCCAAGAGGAGCAAGCTGGGAGATCCACGCTACCTCAATATCTCTGATCTCATCTACAACATGACCTCTGATTACTTTGCTGATGGAATCCGGAGTAAAATAACAGATGACACAACTCACCCTGTCAGCTATTATGAACCAGAGTATTACGTTCCTGATAGTCACGGGACTGCGCATCTCTCGGTGGTGGCAGAAGACGGGAGTGCTGTGGCCGCTACCAGCACCATCAACTTGTACTTTGGCTCGAAGATTCTCTCAAGGTCTACTGGTATACTCTTCAACGACGAGATGGATGACTTCAGCTCTCCCTACATCATCAACGGCTTTGACGTCCCTCCTTCCCCAAATAACTTCATTAAACCAGGTAAAAGGCCCCTCTCCTCCATGTGTCCTGCCATTCTCTTTGACAAAAACCACAAACTCAAAATGGTGGTGGGTGCATCTGGCGGGACAAAAATCACCACAGCAACTGCACTAGTCATCCTCAACTCGCTGTTTTTTAACTACGACGTCAAGAAGGCTGTCACAGAACCACGATTGCACAATCAGCTGCTGCCCAATACTACAGAGGTGGAGACGGACTTTGAAAAGAGTGTGCAGACTGGCTTGGAGCAGAAGAACCACGAGACCACCAAGATGCAGAAGTCCAGTGGGGCGGTGGTCCAGGCCATTGTGCGGCAGGGCGACAAGTTGTGTGCGGAGTCTGACTGCAGGAAAGGAGGCTATCCTGCAGGGTATTAACCCTTCCAACCAGACTGTACCTCCAAACTTATGCTCCGGTTGCGCCCTGGCCTGCGTTTGCAATGGACctctgctcctcttcctccaggaGCAAACAGAACCAAACATATTTTATGGAGTTGAGAATCTGAAACTGAACTGCATCAACCTTACGTGCCTTAAGGGAACCTTCCAGTATGCTCTTTTTCAATACCtccgtttttgttttgtatggccatttttttttaagtgttattgtatttaaagagGTGAGTTTTTGACAACTCGACAAACTCGTAATACCCACCATACAGACTTTCCTGCATTCCCAAGGCTAAGGATAGGAAcgcacacatttatttcagtgctCTATTGGAATGGGGATGGAGGTTTGATCAGCATGTTTTTACATTCACAGATGACTTAAACTCTCCTTTGTAATATCCATCTAGAAATATGTGCTTGAGTAAGGGATGGGTTTTTGACAGAGTTTCAGCTGGAATGAGAAGAGCGGGACATTCCTGCCACAAGACCTTTGTCTCCCTACATCCTCGAATTCCCCAAGGTGCCAATTTCTTGAGTGTCTTGGCTCTGGTCCCTCATTCTTAGCAGATTCTTATTATGcggtttggtttcatttttaaccTTTGTCCAGAATCAGGACTGAGGTCAATGCTTCATGAATATTAGCTATGTGATGctaaaaatagatatattttcatACCGTTTCATTATGTGACAGGCACACCTCTTCAGGAAGAGACTGTTGCACAGAGTATCTAATGTCTTGACAATGTTCCCATAACTTTCCTTTAAAAGGTTAAAGGTTCATAACCAAACTTTGAAGCCTTTATGATTTACTGTAGTGCATATTTAAGCATCAAAGAGAAAATCATTTTTACAGGAGAACTTACAGTATGGAAACCTATTGTgttgtatgtttaaaatgaccTGGATTGTACTGTACtcgtcttttttcttttacaatacAGAGTGAGATAGTTAATCACAACTCCTAGGAaattttttcaatacaaatgccattatttgtatatttgaagGTACACCTCAGAATAGTTGATGATCATATACGTCATCCTTTTTACCTCAGACTTTTGACAGGGCAGtggatttaattcatttttttgttttaataaaaaaagggcTTTGTGGATTTATACCTGAGACCGGTGGCAAGGCTCCATGTTGATTCTGTCTTCAGCTGTATTTCCCCCTTCTTCCTTCCTCctatcaaaataaaagagctgAACTCCAGAGACAAAGCTCAGGACAATGCACTCCAAGGCATACGTTTAATATAAAATCGGTTCTGCTGGgatgctgtgtgtgttcattgCCAATATCACATAAAATACTTagcatttaaatgtacactacattaaaacaaatactgctTACTTTTCCAGATAGGTTTGTGTTGCATAATACTATGAAATATTTCTTTAGGTTCGGTTTTATGTGTGTTCTTACCTGCTACCGTAACGTGGTACTGGCACGCAAacggatacattttaaataattgcataTAAAGCTTGAATTGTAAACAGTGgaaga

Function

GO:

id name namespace
GO:0006749 glutathione metabolic process biological_process
GO:0003840 obsolete gamma-glutamyltransferase activity molecular_function

KEGG:

id description
K18592 GGT1_5, CD224; gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU148241 lncRNA downstream 199737 19577014 ~ 19579032 (-) True G118305
TU148235 lncRNA downstream 246626 19499525 ~ 19532143 (-) True G118299
TU148230 lncRNA downstream 309059 19467808 ~ 19469710 (-) False AMCG00018742
TU148225 lncRNA downstream 318260 19459926 ~ 19460509 (-) True G118289
TU148198 lncRNA downstream 442992 19333308 ~ 19335777 (-) True G118266
TU148418 lncRNA upstream 201801 19994143 ~ 19994359 (-) True G118440
TU148448 lncRNA upstream 240868 20033210 ~ 20035657 (-) True G118466
TU148452 lncRNA upstream 264137 20056479 ~ 20057545 (-) True G118469
TU148455 lncRNA upstream 266630 20058972 ~ 20059409 (-) True G118470
TU148459 lncRNA upstream 281009 20073351 ~ 20074161 (-) True G118474
AMCG00018750 mRNA downstream 92406 19685365 ~ 19686363 (-) True AMCG00018750
AMCG00018747 mRNA downstream 104687 19655440 ~ 19674082 (-) True AMCG00018747
AMCG00018748 mRNA downstream 129503 19638160 ~ 19649266 (-) True AMCG00018748
AMCG00018749 mRNA downstream 175483 19580402 ~ 19603286 (-) True AMCG00018749
AMCG00018742 mRNA downstream 279790 19467768 ~ 19498979 (-) True AMCG00018742
AMCG00018756 mRNA upstream 72650 19864992 ~ 19871894 (-) True AMCG00018756
AMCG00018761 mRNA upstream 102508 19894850 ~ 19913272 (-) True AMCG00018761
AMCG00018760 mRNA upstream 131028 19923370 ~ 19957267 (-) True AMCG00018760
AMCG00018766 mRNA upstream 198991 19991333 ~ 20032507 (-) True AMCG00018766
AMCG00018765 mRNA upstream 244387 20036729 ~ 20050243 (-) True AMCG00018765
TU148096 other downstream 731192 19045682 ~ 19047577 (-) False AMCG00018723
TU147953 other downstream 1304524 18466368 ~ 18474245 (-) True G118075
TU147734 other downstream 2174921 17603356 ~ 17603848 (-) True G117899
TU147639 other downstream 2522498 17226090 ~ 17256271 (-) True G117823
TU148412 other upstream 195332 19987674 ~ 19988168 (-) True G118434
TU148462 other upstream 285746 20078088 ~ 20079882 (-) True G118477
TU148710 other upstream 652155 20444497 ~ 20457523 (-) False AMCG00018788
TU148728 other upstream 697869 20490211 ~ 20490738 (-) False AMCG00018790
TU148729 other upstream 811176 20603518 ~ 20605820 (-) False AMCG00018794

Expression Profile