RNA id: AMCG00018804


Basic Information

Item Value
RNA id AMCG00018804
length 1469
RNA type mRNA
GC content 0.55
exon number 4
gene id AMCG00018804
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20695682 ~ 20697892 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCGACAGTGAGGATCTTTGATATCACTCAGCCTAATGGAATTATATTCTCCTTATAACAAGCACTAACACTCATAATTTAACGggtaggttttatttaattaagatgtTTTAGACCAACGAAAATAGAAATAGCCAAGTGGCTGTATACATGTCATTCCGAGTCTTGGTGTTTATGATTGTGTAGAGGGATAACAACACAATTGCCAGGTTTCGGACACGGGCGTGTTTGTGTCCATGGCGTCTCGCCGGCAGAAGCGTGTGCTGCGCTACGTGGAGGAGGGCAGCCTGCTGAAGCTCAAGTCGTACCTGCGCAAACACCCGGACATCGAGCTCAACTTCTCCCGGGGCAGCAAGGGCCGGAGCCCGCTACACCTGGCCTGCTCACTGGGCGACGACGCTGTCCTCAGACTGCTGCTGAAGAAGGGCGCAGACCCGCTGAGGAAAGACCGCAGAGGGGACACGGCTCTTCACCTGGCCGCTAACAGAGCTCTCAAGCATGGCAAGAGAGCCTATGATGACCTGGTGGTGCCCCTGCGAAAGTCCTGCCCTGTTGCGATGGAGACACCCAACCGCGCGGGTGTCACCCCTCAGGATGTGCTGCAATGGATGAGAGCGGACCAGTTCCAGGATGCAACAATGGCAGGAGACGGCACTACAAAAACAGACCCTGAAAAGGAGTGGCGAGAAAAGCTTTTCGGAGAATGCCAGGATGAGTTCTTCGAGACGTTTGGACAGTATGACAATGATCTCTCCAGGGAGGATGCGGAGCCAGATGATTTTGTGGACTGGGCTGAGCAGATCAGGCGGGAGTACCATGAGAAGCGGCGCGCCCAGGCCCAAAGAGAGGCAGAGGGCTCCGTGAgcgggaggaagaggaagaagaaggagcAGGAGGCCGAAAGCCACAAAGAGCTCCAAGCCAGACTGGAAGCAGAGCATGCCGAGTACTTGGCCCGAGCCGCGAGGAAGGCAGAGGAGGTTCGGTTAGGGAAGAAGCAGAGATATGAGGAGAAGTGCGCTGCCACTTTCCAGGGAGGGTCGGACTCCAGGCTGGGCTACTCGGACATCCCCTGGCCGGCGCCGCAGGGCTCGGTGCGGGAGATGGTGGAGGTGATGCTGCATGGGGCCGACCGCAAGGACAAGACCGCTTTCCGCAAGCTGCTGAAGAGACAGCAGACACTCTGGCACCCGGACAAGTTCGCCCAGCGCTGCGGGGCCCGGCTGGAGGAcagcgagagagggaggatCCTAGACACTGTGACCGCTCTCTCCCAGGAGCTCAATAAACTGTCCGAGAGCATGAAGTGACTGCAGCTCgctttgttaataaaatactactactccatgtgtgtttgtgcctcTGTTTTAACATTATTCCTGCACATAGCACTGTATATTATCTGCCATCTACTTGTCTGCCCACGTCTTTCACGTACTATATTATTAGGTTATTTCTCATAAAGACACC

Function

GO: NA

KEGG:

id description
K09256 NFKBIL1; NF-kappa-B inhibitor-like protein 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU148752 lncRNA upstream 8038 20684865 ~ 20687644 (+) False AMCG00018800
TU148666 lncRNA upstream 75135 20607648 ~ 20620547 (+) True G118644
TU148668 lncRNA upstream 89585 20604704 ~ 20606097 (+) True G118645
TU148662 lncRNA upstream 95326 20599791 ~ 20600356 (+) True G118641
TU148661 lncRNA upstream 97564 20597875 ~ 20598118 (+) True G118640
TU148823 lncRNA downstream 224476 20922368 ~ 20931404 (+) True G118771
TU148961 lncRNA downstream 673018 21370910 ~ 21422770 (+) True G118863
TU149002 lncRNA downstream 983428 21681320 ~ 21681723 (+) True G118885
TU149036 lncRNA downstream 1150523 21848415 ~ 21853057 (+) False AMCG00018820
TU149148 lncRNA downstream 1849380 22547272 ~ 22547691 (+) True G118999
AMCG00018800 mRNA upstream 488 20679280 ~ 20695194 (+) True AMCG00018800
AMCG00018799 mRNA upstream 16861 20670836 ~ 20678821 (+) True AMCG00018799
AMCG00018791 mRNA upstream 50441 20642329 ~ 20645241 (+) True AMCG00018791
AMCG00018793 mRNA upstream 57978 20631003 ~ 20637704 (+) True AMCG00018793
AMCG00018792 mRNA upstream 92403 20602011 ~ 20603279 (+) False AMCG00018792
AMCG00018803 mRNA downstream 330 20698222 ~ 20705953 (+) True AMCG00018803
AMCG00018801 mRNA downstream 8605 20706497 ~ 20723114 (+) True AMCG00018801
AMCG00018802 mRNA downstream 25718 20723610 ~ 20772586 (+) True AMCG00018802
AMCG00018806 mRNA downstream 199022 20896914 ~ 20912077 (+) True AMCG00018806
AMCG00018823 mRNA downstream 993419 21691311 ~ 21692108 (+) True AMCG00018823
TU148663 other upstream 92367 20601956 ~ 20603315 (+) True AMCG00018792
TU148657 other upstream 101543 20593366 ~ 20594139 (+) True G118636
TU148656 other upstream 102666 20592736 ~ 20593016 (+) True G118635
TU148644 other upstream 181191 20514160 ~ 20514491 (+) True G118623
TU148611 other upstream 320870 20373996 ~ 20374812 (+) False AMCG00018781
TU148789 other downstream 57737 20755629 ~ 20756220 (+) False AMCG00018802
TU148883 other downstream 490064 21187956 ~ 21189246 (+) True G118815
TU149795 other downstream 4536190 25234082 ~ 25267781 (+) True G119507
TU149874 other downstream 4786405 25484297 ~ 25485446 (+) False AMCG00018913
TU150090 other downstream 5762728 26460620 ~ 26461227 (+) True G119762

Expression Profile