RNA id: AMCG00018813


Basic Information

Item Value
RNA id AMCG00018813
length 657
RNA type mRNA
GC content 0.44
exon number 4
gene id AMCG00018813
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 21186381 ~ 21190099 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATTGAAACCAAAGTCTGTACCGCAGAGTCGACAATCGAATTCAAGTTTCATTCAGCTAAAACGTTTTCAATTTCCACACGGGTCTTCTTTGATTTGTTCGAACCAATCAGACAAATTCTTCAGGTACTAGAAGGCACTGGGTACTTTGTCGAAGAAAAACTGGTCATTCCTAACCCCCCACCTCggattgtttttttgctgtatcCCTCCAGTCGCTGCCCTTACGTCCTTCTGGCTCTTGAGCAGTGCTGTACTCCAGTAAGGAAAGCTGGGCCAGGGTGGCGTGGAGTGTTTTCCACCATCAGCAGGTTCTCCTTTAGATCCAGGGAGAGCAGGGCAAATTTATCCCTAAACGCCACAATATCAAACAGCCAAATCAAAAACTGCAACAAGAAATGCACCAATTTGGCTCAAATTGCGTTTGGTAAAATGTCAACATTGAAAAAGCTGAATGCCATTTCCAAGTATTATTCCAAGTCAAGATATCCATTTTCGGGCTCCACAAATGTCCTGCTGGAGCTAGAGCCCAGAGATCTGGACACAGAGATGTCTTCGGAGAAGGGCCACTTGATGTTCAGTTTGAAAGAAGTTCAGCTGAAGCAAACAATGGCGTTCCCCATGTGGATAGACAAGTGCAAAACCTATCAATATTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU148874 lncRNA downstream 77580 21108570 ~ 21108801 (-) True G118808
TU148783 lncRNA downstream 462600 20723580 ~ 20723781 (-) True G118735
TU148774 lncRNA downstream 488554 20696834 ~ 20697827 (-) True G118727
TU148771 lncRNA downstream 490193 20695669 ~ 20696188 (-) True G118726
TU148764 lncRNA downstream 502422 20683666 ~ 20683959 (-) False AMCG00018805
TU148977 lncRNA upstream 376910 21567009 ~ 21567253 (-) True G118870
TU148992 lncRNA upstream 404895 21594994 ~ 21616493 (-) True G118881
TU149003 lncRNA upstream 491234 21681333 ~ 21681557 (-) True G118886
TU149006 lncRNA upstream 504884 21694983 ~ 21702048 (-) False G118889
TU149007 lncRNA upstream 504884 21694983 ~ 21702048 (-) False G118889
AMCG00018811 mRNA downstream 5892 21176832 ~ 21180489 (-) True AMCG00018811
AMCG00018809 mRNA downstream 10616 21148532 ~ 21175765 (-) True AMCG00018809
AMCG00018810 mRNA downstream 39498 21142055 ~ 21146883 (-) True AMCG00018810
AMCG00018807 mRNA downstream 173690 20922373 ~ 21012691 (-) True AMCG00018807
AMCG00018808 mRNA downstream 381055 20776919 ~ 20805326 (-) True AMCG00018808
AMCG00018812 mRNA upstream 2848 21192947 ~ 21228267 (-) True AMCG00018812
AMCG00018816 mRNA upstream 49808 21239907 ~ 21266410 (-) True AMCG00018816
AMCG00018815 mRNA upstream 211795 21401894 ~ 21422652 (-) True AMCG00018815
AMCG00018819 mRNA upstream 407370 21597469 ~ 21600672 (-) True AMCG00018819
AMCG00018814 mRNA upstream 421851 21611950 ~ 21623551 (-) True AMCG00018814
TU148773 other downstream 488554 20696834 ~ 20697827 (-) False G118727
TU148729 other downstream 580561 20603518 ~ 20605820 (-) False AMCG00018794
TU148730 other downstream 580561 20603518 ~ 20605820 (-) False AMCG00018794
TU148728 other downstream 695643 20490211 ~ 20490738 (-) False AMCG00018790
TU148710 other downstream 728858 20444497 ~ 20457523 (-) False AMCG00018788
TU149076 other upstream 890365 22080464 ~ 22113695 (-) True G118936
TU149337 other upstream 1614246 22804345 ~ 22806338 (-) True G119144
TU149755 other upstream 3885299 25075398 ~ 25077580 (-) False AMCG00018898
TU149831 other upstream 3944672 25134771 ~ 25171644 (-) True G119538
TU149840 other upstream 3996108 25186207 ~ 25187408 (-) True G119545

Expression Profile