RNA id: AMCG00018829



Basic Information


Item Value
RNA id AMCG00018829
length 273
RNA type mRNA
GC content 0.49
exon number 1
gene id AMCG00018829
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 22091346 ~ 22091618 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCTGGTGAGGTCCGTTATCTATGCGTTAATTCTGGCTAAAATGATCGCGCTGTCCACAGAATCCGGGTATTTGACTGTGAAGTGGTTTGATGAAGACGCGGTACTGAGGGATCTCTTTGAGCTGCTCAGACAGGCTGTCATCGCCCACAACTGCAAGACTCTGGTCAAGTGTCTGGCGTGGCCTTCTTTCAAGAGGCAGACCCACTCTTCATCTCAGCGCTGCTGGCAGAGCTGGAGTTTGAAATGTAACAGTTTGAAATGTAAGACATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU149036 lncRNA upstream 238289 21848415 ~ 21853057 (+) False AMCG00018820
TU149002 lncRNA upstream 409623 21681320 ~ 21681723 (+) True G118885
TU148961 lncRNA upstream 668576 21370910 ~ 21422770 (+) True G118863
TU148823 lncRNA upstream 1159942 20922368 ~ 20931404 (+) True G118771
TU148752 lncRNA upstream 1403702 20684865 ~ 20687644 (+) False AMCG00018800
TU149148 lncRNA downstream 455654 22547272 ~ 22547691 (+) True G118999
TU149154 lncRNA downstream 466595 22558213 ~ 22558419 (+) True G119005
TU149155 lncRNA downstream 469444 22561062 ~ 22561280 (+) True G119006
TU149156 lncRNA downstream 470934 22562552 ~ 22562810 (+) True G119007
TU149157 lncRNA downstream 472752 22564370 ~ 22564707 (+) True G119008
AMCG00018828 mRNA upstream 23 22090703 ~ 22091323 (+) True AMCG00018828
AMCG00018825 mRNA upstream 16725 22047302 ~ 22074621 (+) True AMCG00018825
AMCG00018826 mRNA upstream 54741 22030200 ~ 22036605 (+) True AMCG00018826
AMCG00018820 mRNA upstream 193646 21848370 ~ 21897700 (+) True AMCG00018820
AMCG00018821 mRNA upstream 347607 21715850 ~ 21743739 (+) True AMCG00018821
AMCG00018827 mRNA downstream 23992 22115610 ~ 22138293 (+) True AMCG00018827
AMCG00018834 mRNA downstream 309883 22401501 ~ 22422814 (+) True AMCG00018834
AMCG00018833 mRNA downstream 349185 22440803 ~ 22449329 (+) True AMCG00018833
AMCG00018832 mRNA downstream 363621 22455239 ~ 22460417 (+) True AMCG00018832
AMCG00018836 mRNA downstream 512733 22604351 ~ 22627498 (+) True AMCG00018836
TU148883 other upstream 902100 21187956 ~ 21189246 (+) True G118815
TU148789 other upstream 1335126 20755629 ~ 20756220 (+) False AMCG00018802
TU148663 other upstream 1488031 20601956 ~ 20603315 (+) True AMCG00018792
TU148657 other upstream 1497207 20593366 ~ 20594139 (+) True G118636
TU148656 other upstream 1498330 20592736 ~ 20593016 (+) True G118635
TU149795 other downstream 3142464 25234082 ~ 25267781 (+) True G119507
TU149874 other downstream 3392679 25484297 ~ 25485446 (+) False AMCG00018913
TU150090 other downstream 4369002 26460620 ~ 26461227 (+) True G119762

Expression Profile