RNA id: AMCG00018899


Basic Information

Item Value
RNA id AMCG00018899
length 222
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00018899
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 25084176 ~ 25090285 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTTCCTGGAAGAGTCTTTTGAAGCAGAGAACCGATCAGGAGTTCCAGTGCCCCTGCTGATGCTGGAATGGTGTTGTTTCCCAGCCAGTCATGACTCAACTACCCACAGTGTCAACAGCAGCAGGGCAGGCAGTTCAGATCTCATGCACAATGAGTCATGGGTATTTTATTACTGGGTATTGGGCAACCTGGTACCAGCTGAAACCAGGAAACCCACCTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU149704 lncRNA upstream 233126 24850836 ~ 24851050 (+) True G119429
TU149685 lncRNA upstream 248467 24799950 ~ 24835709 (+) True G119416
TU149688 lncRNA upstream 274357 24807747 ~ 24809819 (+) True G119419
TU149585 lncRNA upstream 485162 24537666 ~ 24599014 (+) True G119354
TU149590 lncRNA upstream 515192 24565712 ~ 24568984 (+) True G119359
TU149814 lncRNA downstream 212901 25303186 ~ 25313495 (+) True G119523
TU149822 lncRNA downstream 241105 25331390 ~ 25338189 (+) True G119529
TU149876 lncRNA downstream 395560 25485845 ~ 25488149 (+) True G119574
TU149934 lncRNA downstream 624648 25714933 ~ 25718248 (+) False AMCG00018922
TU149981 lncRNA downstream 948994 26039279 ~ 26078413 (+) True G119669
AMCG00018886 mRNA upstream 370648 24709674 ~ 24713528 (+) True AMCG00018886
AMCG00018876 mRNA upstream 706248 24372640 ~ 24377928 (+) True AMCG00018876
AMCG00018850 mRNA upstream 2213403 22862980 ~ 22870773 (+) True AMCG00018850
AMCG00018853 mRNA upstream 2249092 22820669 ~ 22835084 (+) True AMCG00018853
AMCG00018852 mRNA upstream 2268313 22807605 ~ 22815863 (+) True AMCG00018852
AMCG00018897 mRNA downstream 846 25091131 ~ 25117419 (+) True AMCG00018897
AMCG00018908 mRNA downstream 46302 25136587 ~ 25144798 (+) True AMCG00018908
AMCG00018902 mRNA downstream 81200 25171485 ~ 25188842 (+) True AMCG00018902
AMCG00018901 mRNA downstream 113387 25203672 ~ 25213155 (+) True AMCG00018901
AMCG00018900 mRNA downstream 155360 25245645 ~ 25261282 (+) True AMCG00018900
TU148883 other upstream 3894930 21187956 ~ 21189246 (+) True G118815
TU148789 other upstream 4327956 20755629 ~ 20756220 (+) False AMCG00018802
TU148663 other upstream 4480861 20601956 ~ 20603315 (+) True AMCG00018792
TU148657 other upstream 4490037 20593366 ~ 20594139 (+) True G118636
TU148656 other upstream 4491160 20592736 ~ 20593016 (+) True G118635
TU149795 other downstream 143797 25234082 ~ 25267781 (+) True G119507
TU149874 other downstream 394012 25484297 ~ 25485446 (+) False AMCG00018913
TU150090 other downstream 1370335 26460620 ~ 26461227 (+) True G119762