RNA id: AMCG00018935



Basic Information


Item Value
RNA id AMCG00018935
length 357
RNA type mRNA
GC content 0.54
exon number 1
gene id AMCG00018935
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 27048846 ~ 27049202 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCAGGAGATGGCGTGCTATGTCAAGGAGACACCACTCTCAGCAGATAGCAGGAAACAGCAggaaaacattgtaaataaaaagcGAGCAGCCCTGGATCCAGAGCAAGTCAGTGCTGAGTGTGGAGTCACCAGGGCCAGAGGAATTGCTGCTGTGGCTGGAGCCTCCAAAACTGGAGGAGCCAGTGCTGTGCCCAGATCACCTGGGGCTGGAGAAAGTGCTTACGGGACACAAAACGGCCACCCTGAAAACCTGGGAACCTACATCCCCTGGgaagggggagaggaagagggagaaagagCCAAAAGAAGTCTGCTGCCTAAAGCAGGAAGGAGAAACTGTGCACTGCACCTGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU150172 lncRNA upstream 193404 26849626 ~ 26855442 (+) True G119836
TU150170 lncRNA upstream 199348 26844689 ~ 26849498 (+) True G119834
TU150155 lncRNA upstream 222254 26825215 ~ 26826592 (+) True G119820
TU150151 lncRNA upstream 270186 26777653 ~ 26778660 (+) True G119817
TU150150 lncRNA upstream 272647 26775743 ~ 26776199 (+) True G119816
TU150242 lncRNA downstream 231804 27281006 ~ 27281572 (+) True G119897
TU150286 lncRNA downstream 465117 27514319 ~ 27515546 (+) True G119941
TU150285 lncRNA downstream 469062 27518264 ~ 27519750 (+) True G119940
TU150317 lncRNA downstream 621431 27670633 ~ 27670834 (+) True G119963
TU150408 lncRNA downstream 865640 27914842 ~ 27915123 (+) True G120029
AMCG00018936 mRNA upstream 139 27047766 ~ 27048707 (+) True AMCG00018936
AMCG00018934 mRNA upstream 173009 26872850 ~ 26875837 (+) True AMCG00018934
AMCG00018927 mRNA upstream 610533 26431716 ~ 26438313 (+) True AMCG00018927
AMCG00018924 mRNA upstream 855362 26153655 ~ 26193484 (+) True AMCG00018924
AMCG00018923 mRNA upstream 971584 26065643 ~ 26077262 (+) True AMCG00018923
AMCG00018939 mRNA downstream 24594 27073796 ~ 27075433 (+) True AMCG00018939
AMCG00018942 mRNA downstream 152750 27201952 ~ 27202650 (+) True AMCG00018942
AMCG00018941 mRNA downstream 210728 27259930 ~ 27273263 (+) True AMCG00018941
AMCG00018943 mRNA downstream 426299 27475501 ~ 27482021 (+) True AMCG00018943
AMCG00018944 mRNA downstream 451158 27500360 ~ 27513931 (+) True AMCG00018944
TU150090 other upstream 587619 26460620 ~ 26461227 (+) True G119762
TU149874 other upstream 1563400 25484297 ~ 25485446 (+) False AMCG00018913
TU149795 other upstream 1781065 25234082 ~ 25267781 (+) True G119507
TU148883 other upstream 5859600 21187956 ~ 21189246 (+) True G118815
TU148789 other upstream 6292626 20755629 ~ 20756220 (+) False AMCG00018802

Expression Profile