RNA id: AMCG00018953


Basic Information

Item Value
RNA id AMCG00018953
length 3000
RNA type mRNA
GC content 0.55
exon number 22
gene id AMCG00018953
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 27808142 ~ 27841558 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTGTGTTTCCTAGATGATGGGATTGGCATGGACCCCAATGAAGCTACACATGTGATACAGTTTGGGAAATCCAACAAAAGGTCGCCAGAGTCTACACAGATCGGACAGTACGGCAACGGGCTGAAATCTGGATCCATGCGAATTGGGAAGGATTTTATTCTTTTCACCAAGAAAGAGGAGAAACTGACTTGCCTGTTCTTGTCCCGAACCTTTCATGAGGAAGAGGGAATAGATGAGgtGATCGTGCCTCTTCCTACTTGGGATTTCAACACCAAGCAGCCAGTCACCGACAACCCTGAGAAGTTTGCCATCGAGACCGAACTGATCTATAAATACTCGCCATTTAAAACTGAAGCACAGCTCATGGAGCAATTCAGCAAAATTGAGGGGGAGAGTGGCACCTTGGTGATTGTCTACAACCTGAAGCTGATGGACAGCCGGGAGCCAGAGCTGGACGTGGAGACAGATTGCCAAGACATCTTGATGTCAGGGATACCCCCAGAGGGAGTGAAACCAGAGAGGCGGTCATTCAGGGCCTACGCTGCTGTTATCTACATTGACCCCCGCATGAGGATCTTTATCCAGGGCCACAAAGTGCGCACCAAGAGACTCTCCTGCTGTCTCTACAAGCCAAGGCTGGACTGGCAGCTCTGGGCCATGCTGCGTAAGTCACAGGACTCCGCAATGATGCTGCGCAGGGAGGCAGATGTCAAGAGGAAAATCCAGGAGGCCAAACAGAAAGCCCTCAAGGAGCCCAAGGAGCTATGCTTTATATTTGGGGTGAATATTGACCAACGCGAGCTTGATGGGATGTTTGTTTACAACTGCAGCCGGCTTATCAAGATGTATGAAAAAGTGGGTCCGCAGCTGGAAGGGGGAATGGCATGTGGTGGTGTGGTGGGTGTGGTGGATGTACCCTATCTGGTGCTAGAGcccacacacaacaaacaggaCTTTGCTGATGCCAAGGAGTACCGGCACCTCCTGAAAGCCATGGGCGAGCACCTGGCACAGTACTGGAAGGACATCTCAATCGCCCAGAAGGGGATTGTTAAATTCTGGGATGAGTTTGGCTACCTGTCAGCCAACTGGAGTCAGCCTCCGTCGAGTGAGCTGCGATACAAGCGGCGCAGAGCCATGGAAATTCCCATCACCATCCAGTGTGACAAGTGTTTGAAGTGGCGAACTCTGCCGTTCCAGCTGGAGGCCGTGGACAAGCAGTACCCTGATACCTGGGTTTGCTCCATGAACCCTGACAGCTCACAGAACAGGTGTGAGACTCTGGAGCAGAAGCAGAACCTCCCTGTAGGAGTCATGCGTAAAGAACTCAAGTCAACAGAGGAGAAGCAGAAGCAGCTGTCAGAGAAGATCCGTCTGCAGCAGGAGAAGCTGGAGACCTTACAGAAAACCACAGTGGTGAAATCCCAAGCAGACATGAAGAGCCTACCCATGGAGGTCAGCCTGAAGCCTGCAGCGGAGAGCAGCTCCCAGGCCAACCGGGCCTCAGAGAGGACACAGCGGCCCCGCTCCCCCCCTCTTCCTGCCATGATCAAGAACGCTCCCAGTCGCCCCCCTCTTGCCAAGCCCCCCCCACTCAGCAAGAAGCCCGCCACCCCCACCCGATCTCCAAAGCTGCCTGCTTCCCTTCCTCTACCCCCTTCTGTCAAGAGAGAGGAGGCCAGCAGAGCCAGGGGAAGCATAACCAAGCCCACACCGCCACCCCCCAAGCCAGCCCTCAGTTCCCGCACTACAGCTGTCAAGACCCTTGCCCGAACCCCCATTCCCAGCAGAGCTGCACTCAGTCACAACGCTAGGGGTGCAACAAAGCAGACGACTCCAGCTGCTGTAGGCGGCCAGCGCAAGAGGAGCTTCCCTCAGGCAGAGagcagtgaggaggaggaggatgaagatgAAGAGAAAGATGacgatgaagaggaggaggacgaggagccACAGCCCAAGAAATCTAAAATGGTGGCAGGCAATATGCAGCACAGAAAAGCAGCTGAAGTGAAGGTGGAGCCAAGGCGTGGCAGAGTGACGGAGCTGCGGGCGCAGACAGCCGAGGGCAGCGTGGTTGTGGAGAGTGCTGTGAAGAGAACACCTGGCCCACAGAGGAGGAGCCTCCCTCCTGTACAAagcagtgaggaggaggaggaggaggaggaggaggaggaggaggaggaaaagcagatctctggaaaacaaaaactggcgGCAGCAATTGCGCCCCAGGTGTCCAGAGCAGCACTGTCTCGGCCCGAGATGCAGCCAGGTGCACACAGAGCCCAGAGCGGCGCAGTGGTGGAGatcACAGACAGTCCCGATGAGGAGGAGACCGGAGTGGATCTGAAGATGTCTCAAAAAGATAAGGGTCTGCTGGTAGAGGTGAAGGTGAATAAGGAGTGGTACACAGGCAGAGTGTCTGCTGTGGAGACTGGCAAGCAGGGCATTCGTTGGAAAGTGAAGTTTGACTATGTGCCCACTACAACAACTCCCCGGGACAGATGTGCTGATGTGCGCTTGATGCGTCCACCCTCCCCGGAGTCTCAGAGCCCTGACACCCTGGAAGAGGAGGGGGTCTCGGCCAGAATGGAGCCAGATACCACACAGCCTGGCACCAGCCGCGAGGTCACTGACAGCCTGGTGGTTATGATGAGGACATTTCTCCGGTACTTTTTCCCTCCGGATTTCCGGATTCCCAAAGATGATGTGAACAACATGAGTGCGGAGGAGCTGGTGGCATTCCCAATGAAGGAGTATTTCCAGCAGTATGAGCTGGGGCTGCAGAGCCTGTGTAACTCATACCAGAGCCGGGCGGACGCTCGTGCACGGGCTGTTGAGGAGAAGAGTAACAGTGCAGAGGCCAGgctcagagagacagaggagaagCTACAGAAACTCAGGACCAACATCGTGGCTCTGCTGCAGAAAGTCCAGGAGGTGAGGAGCTGGGGTCTGACCTGGAGTGGGTGGTTCTCCCGTATATACCATTGA

Function

GO: NA

KEGG:

id description
K24135 MORC; MORC family CW-type zinc finger protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150352 lncRNA downstream 38343 27769555 ~ 27769799 (-) True G119995
TU150345 lncRNA downstream 65107 27740932 ~ 27743035 (-) True G119988
TU150343 lncRNA downstream 74769 27733063 ~ 27733373 (-) True G119986
TU150338 lncRNA downstream 133576 27673846 ~ 27674566 (-) True G119981
TU150307 lncRNA downstream 235313 27571254 ~ 27572829 (-) True G119956
TU150405 lncRNA upstream 57764 27899322 ~ 27899556 (-) True G120026
TU150410 lncRNA upstream 90109 27931667 ~ 27933173 (-) True G120031
TU150549 lncRNA upstream 512542 28354100 ~ 28354838 (-) True G120145
TU150564 lncRNA upstream 563455 28405013 ~ 28405304 (-) True G120160
AMCG00018946 mRNA downstream 240732 27553426 ~ 27567410 (-) True AMCG00018946
AMCG00018948 mRNA downstream 411916 27382003 ~ 27396226 (-) True AMCG00018948
AMCG00018947 mRNA downstream 436772 27299590 ~ 27371370 (-) True AMCG00018947
AMCG00018940 mRNA downstream 583196 27217162 ~ 27224946 (-) True AMCG00018940
AMCG00018937 mRNA downstream 744161 26943064 ~ 27063981 (-) True AMCG00018937
AMCG00018952 mRNA upstream 21227 27862785 ~ 27878157 (-) True AMCG00018952
AMCG00018955 mRNA upstream 108154 27949712 ~ 27963857 (-) True AMCG00018955
AMCG00018954 mRNA upstream 133434 27974992 ~ 27984938 (-) True AMCG00018954
AMCG00018956 mRNA upstream 156597 27998155 ~ 28007014 (-) True AMCG00018956
AMCG00018961 mRNA upstream 297998 28139556 ~ 28154700 (-) True AMCG00018961
TU150237 other downstream 565568 27230873 ~ 27242574 (-) True G119893
TU150163 other downstream 994069 26813480 ~ 26814073 (-) True G119827
TU149840 other downstream 2620734 25186207 ~ 25187408 (-) True G119545
TU149831 other downstream 2636498 25134771 ~ 25171644 (-) True G119538
TU149755 other downstream 2730562 25075398 ~ 25077580 (-) False AMCG00018898

Expression Profile