RNA id: AMCG00018967


Basic Information

Item Value
RNA id AMCG00018967
length 813
RNA type mRNA
GC content 0.57
exon number 6
gene id AMCG00018967
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 28370362 ~ 28376458 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGAAGTGTGTGTCCTGTGTTTAGGAAGATGCCTGAGCGGGAGGATGAGCAGCTGACGGCTGCCACTCGCCTGctggagaagaggagagagatggCCGAAGTGGAGCAGGCGCTGGCCACCCAGAAAGAGGAGTTCCATGTGAAGATGGAGAGTCTTCACCAACGCAGAGAGGAGCTGGGGAACAAAGAGGAGCTGCTGAAGGAATCTCTCctcaaatttgacaagtttctCAAAGCACGGGCTGAGAGGGACATGGCGAGGCAGAAGGACCGCGACATCGAGCGGTTAGGGAAGGAGATCGATTCCCTGCAGGCCAGGAAGGAGCGATTGCAGGGGAGAGTGAAGAACAACGCCATCTACTGGGAGTACATGAACAAAGTCACGAACAGATCCGAGAAGTTTGAGGAGATCCGGGAGCTGACTGTCCGCTTTGACGCACTGCTGTCCACGCGGGAGCAGCTACTGCAGCGGGAGAGCGAGGGGCAGGAGCGCATGGAGGCAGAGCGAATGCGACTGCACCGCTACACCAAGGACTGCAGCGACCTCATTCTGCAGTACAACAACCAGCTGGCCACCCTGCAGACACAGCTGGACGATGCCCGCTCACAGGCCCTCAAGTGGGAGTCCACCTGGAACCACATCCAGGCCACAGCAGCCAAGAAGACCCTCTTGCTGGGCCAGATCAAGATGGTGACTCTCAATCTGTACCAGATGCTTAACAAGCAGACCAAGCAGGAGGGTGAAGTGGCAGTAGAGGATACGGCTGGGCAGCTGGACAAGTTTGTCCACTTCAGAGAGGAGATGAGCAAATGA

Function

GO: NA

KEGG:

id description
ko03013 Nucleocytoplasmic transport

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150549 lncRNA downstream 15524 28354100 ~ 28354838 (-) True G120145
TU150410 lncRNA downstream 437189 27931667 ~ 27933173 (-) True G120031
TU150405 lncRNA downstream 470806 27899322 ~ 27899556 (-) True G120026
TU150352 lncRNA downstream 600563 27769555 ~ 27769799 (-) True G119995
TU150345 lncRNA downstream 627327 27740932 ~ 27743035 (-) True G119988
TU150564 lncRNA upstream 28555 28405013 ~ 28405304 (-) True G120160
AMCG00018968 mRNA downstream 19339 28350625 ~ 28351023 (-) True AMCG00018968
AMCG00018969 mRNA downstream 19834 28341766 ~ 28350528 (-) True AMCG00018969
AMCG00018966 mRNA downstream 31005 28303047 ~ 28339357 (-) True AMCG00018966
AMCG00018958 mRNA downstream 106595 28245468 ~ 28263767 (-) True AMCG00018958
AMCG00018960 mRNA downstream 148311 28203706 ~ 28222051 (-) True AMCG00018960
TU150237 other downstream 1127788 27230873 ~ 27242574 (-) True G119893
TU150163 other downstream 1556289 26813480 ~ 26814073 (-) True G119827
TU149840 other downstream 3182954 25186207 ~ 25187408 (-) True G119545
TU149831 other downstream 3198718 25134771 ~ 25171644 (-) True G119538
TU149755 other downstream 3292782 25075398 ~ 25077580 (-) False AMCG00018898

Expression Profile