RNA id: AMCG00018968


Basic Information

Item Value
RNA id AMCG00018968
length 399
RNA type mRNA
GC content 0.59
exon number 1
gene id AMCG00018968
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 28350625 ~ 28351023 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCCAGGCTGGGATGCCCCCTGGGTGTGGAAGGAAGAGCGTACCAAGGTCCGGCCCCTGCTCTGGAGTCCCCCCACAATCGCCCCCTCTTCTACACATGCTCCTCCTGCAGCTTCTGCCAGTCATCCGCCGGTGAAATCAGTCGCCCCGGAAACCAAGTCAGGCAGTGCAGAGTTCCTATCCTATCAGGGAAAGACAGACTTCTGGAAGAGGAGGGtgagcgaggaggaggaggaggaggaggaggaggaggagaaggagcagGGGGAGAGCCTGAAAGGGAGGCCTGCATCAGCATTCAGTAGGCTGGGGGTCGTACAACGAAAATGCCTGAGCCCACCCAATAGGAGGCCCCTGACCACCGACTCTATTAAGACCAGACCTCACTGGAAGTATTGA

Function

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0051301 cell division biological_process
GO:0006259 DNA metabolic process biological_process

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast
ko04114 Oocyte meiosis
ko04218 Cellular senescence

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150410 lncRNA downstream 417452 27931667 ~ 27933173 (-) True G120031
TU150405 lncRNA downstream 451069 27899322 ~ 27899556 (-) True G120026
TU150352 lncRNA downstream 580826 27769555 ~ 27769799 (-) True G119995
TU150345 lncRNA downstream 607590 27740932 ~ 27743035 (-) True G119988
TU150343 lncRNA downstream 617252 27733063 ~ 27733373 (-) True G119986
TU150549 lncRNA upstream 3077 28354100 ~ 28354838 (-) True G120145
TU150564 lncRNA upstream 53990 28405013 ~ 28405304 (-) True G120160
AMCG00018969 mRNA downstream 97 28341766 ~ 28350528 (-) True AMCG00018969
AMCG00018966 mRNA downstream 11268 28303047 ~ 28339357 (-) True AMCG00018966
AMCG00018958 mRNA downstream 86858 28245468 ~ 28263767 (-) True AMCG00018958
AMCG00018960 mRNA downstream 128574 28203706 ~ 28222051 (-) True AMCG00018960
AMCG00018962 mRNA downstream 147284 28191718 ~ 28203341 (-) True AMCG00018962
AMCG00018967 mRNA upstream 19339 28370362 ~ 28376458 (-) True AMCG00018967
TU150237 other downstream 1108051 27230873 ~ 27242574 (-) True G119893
TU150163 other downstream 1536552 26813480 ~ 26814073 (-) True G119827
TU149840 other downstream 3163217 25186207 ~ 25187408 (-) True G119545
TU149831 other downstream 3178981 25134771 ~ 25171644 (-) True G119538
TU149755 other downstream 3273045 25075398 ~ 25077580 (-) False AMCG00018898

Expression Profile