Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU143378 |
| length | 898 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G114485 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 2416807 ~ 2417796 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0097458 | obsolete neuron part | cellular_component |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU143377 | lncRNA | upstream | 4018 | 2410477 ~ 2412789 (+) | True | G114484 |
| TU143296 | lncRNA | upstream | 150056 | 2262676 ~ 2266751 (+) | False | AMCG00018119 |
| TU143212 | lncRNA | upstream | 366630 | 2048571 ~ 2050177 (+) | True | G114359 |
| TU143197 | lncRNA | upstream | 395177 | 2006906 ~ 2021630 (+) | True | G114346 |
| TU143178 | lncRNA | upstream | 432657 | 1983651 ~ 1984150 (+) | True | G114332 |
| TU143420 | lncRNA | downstream | 73517 | 2491313 ~ 2568938 (+) | False | G114518 |
| TU143435 | lncRNA | downstream | 155841 | 2573637 ~ 2573867 (+) | True | G114531 |
| TU143455 | lncRNA | downstream | 191347 | 2609143 ~ 2609412 (+) | True | G114548 |
| TU143461 | lncRNA | downstream | 250664 | 2668460 ~ 2668661 (+) | True | G114553 |
| TU143463 | lncRNA | downstream | 253111 | 2670907 ~ 2742686 (+) | True | G114555 |
| AMCG00018128 | mRNA | upstream | 15398 | 2393305 ~ 2401409 (+) | True | AMCG00018128 |
| AMCG00018129 | mRNA | upstream | 24809 | 2385300 ~ 2391998 (+) | True | AMCG00018129 |
| AMCG00018126 | mRNA | upstream | 34720 | 2356277 ~ 2382087 (+) | True | AMCG00018126 |
| AMCG00018127 | mRNA | upstream | 82776 | 2328704 ~ 2334031 (+) | True | AMCG00018127 |
| AMCG00018125 | mRNA | upstream | 111363 | 2302964 ~ 2305444 (+) | True | AMCG00018125 |
| AMCG00018131 | mRNA | downstream | 3469 | 2421265 ~ 2432982 (+) | True | AMCG00018131 |
| AMCG00018133 | mRNA | downstream | 15602 | 2433398 ~ 2433656 (+) | True | AMCG00018133 |
| AMCG00018130 | mRNA | downstream | 16660 | 2434456 ~ 2443528 (+) | True | AMCG00018130 |
| AMCG00018132 | mRNA | downstream | 31993 | 2449789 ~ 2464758 (+) | True | AMCG00018132 |
| AMCG00018138 | mRNA | downstream | 156599 | 2574395 ~ 2579357 (+) | True | AMCG00018138 |
| TU143173 | other | upstream | 436428 | 1979046 ~ 1980379 (+) | False | AMCG00018106 |
| TU143174 | other | upstream | 436428 | 1979046 ~ 1980379 (+) | False | AMCG00018106 |
| TU143175 | other | upstream | 436428 | 1979046 ~ 1980379 (+) | False | AMCG00018106 |
| TU143176 | other | upstream | 436428 | 1979046 ~ 1980379 (+) | False | AMCG00018106 |
| TU143170 | other | upstream | 438080 | 1977004 ~ 1978727 (+) | True | G114330 |
| TU143421 | other | downstream | 148288 | 2566084 ~ 2567535 (+) | True | G114518 |
| TU143458 | other | downstream | 223050 | 2640846 ~ 2647774 (+) | True | G114551 |
| TU143856 | other | downstream | 1773921 | 4191717 ~ 4193114 (+) | False | AMCG00018196 |
| TU144009 | other | downstream | 2183694 | 4601490 ~ 4603989 (+) | False | AMCG00018216 |
| TU144084 | other | downstream | 2343722 | 4761518 ~ 4763905 (+) | True | G115049 |
