RNA id: TU144711



Basic Information


Item Value
RNA id TU144711
length 204
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G115534
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 7001802 ~ 7002005 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


agtgatccaaggatcctatccagtctgtttttgaatgttcccaaattgtctcttcagccacatcgctggggagtttgttcagattgtgatgcctttctgtgtgaagaagtgtctcctgttttccgtcttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgccgatctggaaaagctcctctgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU144532 lncRNA downstream 782586 6217528 ~ 6219216 (-) True G115395
TU144448 lncRNA downstream 955184 6046030 ~ 6046618 (-) True G115332
TU144388 lncRNA downstream 1247780 5750285 ~ 5754022 (-) False G115279
TU144390 lncRNA downstream 1247881 5750092 ~ 5753921 (-) True G115279
TU144387 lncRNA downstream 1247881 5750285 ~ 5753921 (-) False G115279
TU144760 lncRNA upstream 732092 7734097 ~ 7734384 (-) True G115577
TU144762 lncRNA upstream 739969 7741974 ~ 7742210 (-) True G115579
TU144763 lncRNA upstream 740536 7742541 ~ 7742747 (-) True G115580
TU144788 lncRNA upstream 840332 7842337 ~ 7842708 (-) True G115596
TU144791 lncRNA upstream 858311 7860316 ~ 7868626 (-) True G115599
AMCG00018304 mRNA downstream 125624 6866912 ~ 6876178 (-) True AMCG00018304
AMCG00018301 mRNA downstream 151008 6827619 ~ 6850794 (-) True AMCG00018301
AMCG00018299 mRNA downstream 175579 6821595 ~ 6826223 (-) True AMCG00018299
AMCG00018298 mRNA downstream 218219 6780771 ~ 6783583 (-) True AMCG00018298
AMCG00018290 mRNA downstream 224364 6776337 ~ 6777438 (-) True AMCG00018290
AMCG00018302 mRNA upstream 131893 7133898 ~ 7136847 (-) True AMCG00018302
AMCG00018303 mRNA upstream 151086 7153091 ~ 7160634 (-) True AMCG00018303
AMCG00018307 mRNA upstream 719259 7721264 ~ 7743678 (-) True AMCG00018307
AMCG00018306 mRNA upstream 743091 7745096 ~ 7763759 (-) True AMCG00018306
AMCG00018310 mRNA upstream 881202 7883207 ~ 7894569 (-) True AMCG00018310
TU144582 other downstream 358530 6638342 ~ 6643272 (-) False AMCG00018291
TU144568 other downstream 378189 6618475 ~ 6623613 (-) False AMCG00018291
TU144435 other downstream 1050747 5950421 ~ 5951055 (-) True G115320
TU144300 other downstream 1635048 5356846 ~ 5366754 (-) True AMCG00018251
TU144251 other downstream 1697373 5300107 ~ 5304429 (-) True G115183
TU144767 other upstream 741213 7743218 ~ 7773892 (-) True G115581
TU145207 other upstream 2237807 9239812 ~ 9258202 (-) True AMCG00018364
TU145480 other upstream 2917041 9919046 ~ 9924582 (-) True G116165
TU145571 other upstream 3127555 10129560 ~ 10136769 (-) False AMCG00018416
TU145658 other upstream 3305585 10307590 ~ 10309195 (-) False AMCG00018424

Expression Profile