Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU145266 |
| length | 285 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G116002 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 9472497 ~ 9477108 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU145252 | lncRNA | upstream | 25477 | 9445610 ~ 9447020 (+) | False | AMCG00018368 |
| TU145254 | lncRNA | upstream | 35194 | 9437032 ~ 9437303 (+) | True | G115990 |
| TU145190 | lncRNA | upstream | 242356 | 9228010 ~ 9230141 (+) | True | G115939 |
| TU145180 | lncRNA | upstream | 273057 | 9198877 ~ 9199440 (+) | True | G115931 |
| TU145137 | lncRNA | upstream | 435914 | 9036330 ~ 9036583 (+) | True | G115896 |
| TU145270 | lncRNA | downstream | 6258 | 9483366 ~ 9486146 (+) | False | AMCG00018369 |
| TU145282 | lncRNA | downstream | 35206 | 9512314 ~ 9512754 (+) | False | AMCG00018374 |
| TU145288 | lncRNA | downstream | 50374 | 9527482 ~ 9527757 (+) | True | G116011 |
| TU145296 | lncRNA | downstream | 87618 | 9564726 ~ 9566691 (+) | True | G116019 |
| TU145297 | lncRNA | downstream | 91356 | 9568464 ~ 9569497 (+) | True | G116020 |
| AMCG00018368 | mRNA | upstream | 25353 | 9439657 ~ 9447144 (+) | True | AMCG00018368 |
| AMCG00018365 | mRNA | upstream | 112811 | 9354703 ~ 9359686 (+) | True | AMCG00018365 |
| AMCG00018366 | mRNA | upstream | 176592 | 9291332 ~ 9295905 (+) | True | AMCG00018366 |
| AMCG00018359 | mRNA | upstream | 187079 | 9259454 ~ 9285418 (+) | True | AMCG00018359 |
| AMCG00018360 | mRNA | upstream | 227263 | 9241362 ~ 9245234 (+) | False | AMCG00018360 |
| AMCG00018369 | mRNA | downstream | 3844 | 9480952 ~ 9484834 (+) | True | AMCG00018369 |
| AMCG00018374 | mRNA | downstream | 35272 | 9512380 ~ 9513236 (+) | True | AMCG00018374 |
| AMCG00018373 | mRNA | downstream | 42559 | 9519667 ~ 9520987 (+) | True | AMCG00018373 |
| AMCG00018371 | mRNA | downstream | 68433 | 9545541 ~ 9561135 (+) | True | AMCG00018371 |
| AMCG00018372 | mRNA | downstream | 84953 | 9562061 ~ 9564564 (+) | True | AMCG00018372 |
| TU145192 | other | upstream | 230682 | 9239811 ~ 9241815 (+) | True | AMCG00018360 |
| TU145182 | other | upstream | 270911 | 9199657 ~ 9201586 (+) | False | AMCG00018358 |
| TU145016 | other | upstream | 777778 | 8693364 ~ 8694719 (+) | True | G115789 |
| TU144853 | other | upstream | 1350326 | 8119778 ~ 8122171 (+) | True | G115648 |
| TU144781 | other | upstream | 1578048 | 7893627 ~ 7894449 (+) | True | G115590 |
| TU145295 | other | downstream | 85053 | 9562161 ~ 9564404 (+) | False | AMCG00018372 |
| TU145312 | other | downstream | 131969 | 9609077 ~ 9612918 (+) | False | AMCG00018380 |
| TU146017 | other | downstream | 2489139 | 11966247 ~ 11970778 (+) | True | G116585 |
| TU146176 | other | downstream | 3038695 | 12515803 ~ 12519881 (+) | True | AMCG00018491 |
| TU146344 | other | downstream | 3776235 | 13253343 ~ 13255794 (+) | True | G116832 |
