RNA id: TU145598


Basic Information

Item Value
RNA id TU145598
length 245
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G116255
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 10163278 ~ 10163522 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ACAAATAGTGGAGAAACTCCACAACTCTAGCAGCTGCAGATTAATTCAAACAGCACCAGCCTCACCTGACCATGCTTCTTATTGCACTGCCACTCGCCGTCATACAGGGCTCCGCTGGCGTAGTAGAACTTGCCGTGACCGTGGCGCAGACCCTGCACAAACGCCCCCACGTACTCGTTCCGCAGGGGGTACTGGGAGCCTGGCACTCGCTTCAGGAACCAGGTATGAGTGCCCTGTCCATGCTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU145572 lncRNA downstream 18679 10143425 ~ 10144599 (-) True G116236
TU145444 lncRNA downstream 374699 9784430 ~ 9788579 (-) True G116136
TU145440 lncRNA downstream 385929 9774306 ~ 9777349 (-) True AMCG00018390
TU145352 lncRNA downstream 635542 9527492 ~ 9527736 (-) True G116065
TU145342 lncRNA downstream 681126 9480910 ~ 9482152 (-) True G116058
TU145599 lncRNA upstream 5726 10169248 ~ 10169622 (-) True G116256
TU145719 lncRNA upstream 445496 10609018 ~ 10671019 (-) True G116352
TU145723 lncRNA upstream 575029 10738551 ~ 10739008 (-) True G116355
TU145734 lncRNA upstream 807358 10970880 ~ 10971087 (-) True G116365
TU145736 lncRNA upstream 809573 10973095 ~ 10973307 (-) True G116367
AMCG00018417 mRNA downstream 12769 10147532 ~ 10150509 (-) True AMCG00018417
AMCG00018416 mRNA downstream 28659 10120599 ~ 10134619 (-) True AMCG00018416
AMCG00018410 mRNA downstream 121762 10029502 ~ 10041516 (-) True AMCG00018410
AMCG00018408 mRNA downstream 148385 10004233 ~ 10014893 (-) True AMCG00018408
AMCG00018409 mRNA downstream 161128 9986174 ~ 10002150 (-) True AMCG00018409
AMCG00018418 mRNA upstream 10898 10174420 ~ 10189358 (-) True AMCG00018418
AMCG00018421 mRNA upstream 32687 10196209 ~ 10198405 (-) True AMCG00018421
AMCG00018419 mRNA upstream 39257 10202779 ~ 10218488 (-) True AMCG00018419
AMCG00018420 mRNA upstream 60150 10223672 ~ 10231201 (-) True AMCG00018420
AMCG00018424 mRNA upstream 139532 10303054 ~ 10332982 (-) True AMCG00018424
TU145571 other downstream 26509 10129560 ~ 10136769 (-) False AMCG00018416
TU145480 other downstream 238696 9919046 ~ 9924582 (-) True G116165
TU145207 other downstream 905076 9239812 ~ 9258202 (-) True AMCG00018364
TU144767 other downstream 2389386 7743218 ~ 7773892 (-) True G115581
TU144582 other downstream 3520006 6638342 ~ 6643272 (-) False AMCG00018291
TU145658 other upstream 144068 10307590 ~ 10309195 (-) False AMCG00018424
TU145667 other upstream 171679 10335201 ~ 10342089 (-) True G116306
TU145668 other upstream 196607 10360129 ~ 10385216 (-) True G116307
TU145708 other upstream 402273 10565795 ~ 10572002 (-) False AMCG00018431
TU145777 other upstream 898133 11061655 ~ 11068318 (-) False AMCG00018437

Expression Profile