RNA id: TU145736


Basic Information

Item Value
RNA id TU145736
length 213
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G116367
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 10973095 ~ 10973307 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGTTGCTTCCCAGTGTAAAGCTGCAGGAGACTCACCCATCAGGAAATCGAAGATGGTCATGTCCATGATATCCAAGAGACGTGTGCCGCTGTCGTAGGGGGGTGTCTGTTTGACCTCCTCACAGTAATCGGGGTCCACTTCCCACCTGGCAACACACATGCTACTTGTCAGATACCATAGACCTGGGCTGGCCAACCCTCCATCTGGTTTGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU145734 lncRNA downstream 2008 10970880 ~ 10971087 (-) True G116365
TU145723 lncRNA downstream 234087 10738551 ~ 10739008 (-) True G116355
TU145719 lncRNA downstream 302076 10609018 ~ 10671019 (-) True G116352
TU145599 lncRNA downstream 803473 10169248 ~ 10169622 (-) True G116256
TU145598 lncRNA downstream 809573 10163278 ~ 10163522 (-) True G116255
TU145737 lncRNA upstream 3915 10977222 ~ 10979678 (-) True G116368
TU145779 lncRNA upstream 114867 11088174 ~ 11146940 (-) True AMCG00018440
TU145812 lncRNA upstream 226271 11199578 ~ 11202888 (-) False G116428
TU145841 lncRNA upstream 279052 11252359 ~ 11253565 (-) True G116446
TU145849 lncRNA upstream 307059 11280366 ~ 11353097 (-) True G116454
AMCG00018431 mRNA downstream 392990 10562554 ~ 10580105 (-) True AMCG00018431
AMCG00018430 mRNA downstream 480132 10485173 ~ 10492963 (-) True AMCG00018430
AMCG00018428 mRNA downstream 588238 10377293 ~ 10384857 (-) True AMCG00018428
AMCG00018427 mRNA downstream 606840 10342142 ~ 10366255 (-) True AMCG00018427
AMCG00018424 mRNA downstream 640113 10303054 ~ 10332982 (-) True AMCG00018424
AMCG00018437 mRNA upstream 88321 11061628 ~ 11083780 (-) True AMCG00018437
AMCG00018440 mRNA upstream 115134 11088441 ~ 11090570 (-) False AMCG00018440
AMCG00018439 mRNA upstream 117989 11091296 ~ 11118823 (-) True AMCG00018439
AMCG00018438 mRNA upstream 166782 11140089 ~ 11142854 (-) True AMCG00018438
AMCG00018447 mRNA upstream 200548 11173855 ~ 11196168 (-) True AMCG00018447
TU145708 other downstream 401093 10565795 ~ 10572002 (-) False AMCG00018431
TU145668 other downstream 587879 10360129 ~ 10385216 (-) True G116307
TU145667 other downstream 631006 10335201 ~ 10342089 (-) True G116306
TU145658 other downstream 663900 10307590 ~ 10309195 (-) False AMCG00018424
TU145571 other downstream 836326 10129560 ~ 10136769 (-) False AMCG00018416
TU145777 other upstream 88348 11061655 ~ 11068318 (-) False AMCG00018437
TU145811 other upstream 226271 11199578 ~ 11202888 (-) True G116428
TU146006 other upstream 937707 11911014 ~ 11911336 (-) True G116577
TU146385 other upstream 2279778 13253085 ~ 13255769 (-) False AMCG00018522
TU146918 other upstream 3530096 14503403 ~ 14520875 (-) True G117267

Expression Profile