RNA id: TU146724


Basic Information

Item Value
RNA id TU146724
length 626
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G117122
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14232796 ~ 14233624 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CATCTGGGCTCTGCAGTAGCAGCTGTGTCCCCCATTGTCTTCTCTGTCCTCCtgcttctctctgtgtctcacagtgcgctctcctctctctctctgtgcctccgGTCCTCCATCCCTCCGGGGTCACCGGCTCCTCTGTCGTTCTTGTTGACTGTTTCGTCTCGTATGTCCACGGCCTCCAGAGCTCAGgaccacacagcacagcactacaatAACAGTACAATGAAGAAGTAGGATACACCCTGGTACTATACAGCGATAAAACCGCAGAATACTGCAATGGCGCTATAATGTACAGTGTATTGCGCTTACGGTGTATTGTTTAGTGCACTGTATTGCACGGTTATACTGTTGTGTATTTCGGTCCCATGCACAATAGTGTCCGGTGTATTAAGCGCAGAGTAATCCCGCAGCGCAGCTCCGTCCAGTTTTGTGATAGTTGACGCGCACTTCCTGTATGAGTTCGCGACGGTCGGGTGGCTGTGCCGGCGCGGTCTCCCCCGGCTGCTCTCTGCTGGCTCTGGGATGCACACAGTGTACCTCTGCTTCTCCGCCTCTCTACTTCACTCTCTTGCCATTTCTTTCATGCTTTCATTTACGTCTGTGCAGTCTCACGGAGTAATGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU146648 lncRNA downstream 132689 14095291 ~ 14100107 (-) True G117066
TU146575 lncRNA downstream 266527 13897500 ~ 13966269 (-) True G117015
TU146572 lncRNA downstream 342693 13887421 ~ 13890103 (-) True G117012
TU146570 lncRNA downstream 345429 13886309 ~ 13887367 (-) True G117011
TU146497 lncRNA downstream 544682 13645368 ~ 13688114 (-) False AMCG00018528
TU146737 lncRNA upstream 11794 14245418 ~ 14248073 (-) False AMCG00018555
TU146857 lncRNA upstream 78634 14312258 ~ 14399555 (-) True G117221
TU146864 lncRNA upstream 88461 14322085 ~ 14408949 (-) True G117223
TU146870 lncRNA upstream 123811 14357435 ~ 14402346 (-) True G117227
TU146879 lncRNA upstream 132841 14366465 ~ 14367911 (-) True G117234
AMCG00018554 mRNA downstream 9479 14208436 ~ 14223317 (-) True AMCG00018554
AMCG00018556 mRNA downstream 26673 14205321 ~ 14206123 (-) True AMCG00018556
AMCG00018557 mRNA downstream 30509 14201096 ~ 14202287 (-) True AMCG00018557
AMCG00018544 mRNA downstream 48505 14182493 ~ 14184291 (-) True AMCG00018544
AMCG00018543 mRNA downstream 54484 14174101 ~ 14178312 (-) True AMCG00018543
AMCG00018555 mRNA upstream 8921 14242545 ~ 14263154 (-) True AMCG00018555
AMCG00018560 mRNA upstream 32471 14266095 ~ 14288995 (-) True AMCG00018560
AMCG00018561 mRNA upstream 59594 14293218 ~ 14316293 (-) True AMCG00018561
AMCG00018563 mRNA upstream 87707 14321331 ~ 14328617 (-) True AMCG00018563
AMCG00018559 mRNA upstream 99168 14332792 ~ 14359292 (-) True AMCG00018559
TU146385 other downstream 977027 13253085 ~ 13255769 (-) False AMCG00018522
TU146006 other downstream 2321460 11911014 ~ 11911336 (-) True G116577
TU145811 other downstream 3029908 11199578 ~ 11202888 (-) True G116428
TU145777 other downstream 3164478 11061655 ~ 11068318 (-) False AMCG00018437
TU145708 other downstream 3660794 10565795 ~ 10572002 (-) False AMCG00018431
TU146918 other upstream 269779 14503403 ~ 14520875 (-) True G117267
TU147067 other upstream 502514 14736138 ~ 14738312 (-) True G117377
TU147284 other upstream 1265038 15498662 ~ 15518181 (-) False AMCG00018617
TU147285 other upstream 1265038 15498662 ~ 15516282 (-) False AMCG00018617
TU147593 other upstream 2775274 17008898 ~ 17009301 (-) True G117784

Expression Profile