RNA id: TU147075



Basic Information


Item Value
RNA id TU147075
length 340
RNA type TUCP
GC content 0.56
exon number 2
gene id G117379
representative False

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14774115 ~ 14777110 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGTCAATATTGCTAATGTGACTCGTGCTAATAAGATATCAGAAGTGAACAGAATATTCCATTCTCCCAGAATGCCTCACCAGGATTTCAATGGTACCCCTGGAGATCTTGGTGGTGATACCAAGGGCCTGGAAGAAGGAGGTTTTCTCGGGGCCCAGCCCAGTGTTCTGCGCCGGCACAGTCACCTCACAGGGAGCGATGGCACCTGCACGCGCCGCTGCTGGCACCTGTTGGCCAGCAGCATGTCCCTGATCTCGGTCAGATCCTCCTTGGTGAACACGAAGCCCACGTTCCCACGGATGTGTGGCAGCAGCCTGGGGCAAAGGGAGGGGAAATTAGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU147070 lncRNA upstream 549 14774115 ~ 14775240 (+) False G117379
TU147072 lncRNA upstream 549 14774115 ~ 14775240 (+) False G117379
TU147073 lncRNA upstream 549 14774115 ~ 14775240 (+) False G117379
TU147042 lncRNA upstream 37462 14736096 ~ 14738327 (+) True G117353
TU146834 lncRNA upstream 241589 14533963 ~ 14534200 (+) True G117209
TU147082 lncRNA downstream 7012 14783506 ~ 14784333 (+) True G117381
TU147083 lncRNA downstream 9531 14786025 ~ 14786487 (+) True G117382
TU147088 lncRNA downstream 16302 14792796 ~ 14793804 (+) True G117387
TU147089 lncRNA downstream 17391 14793885 ~ 14794239 (+) True G117388
TU147090 lncRNA downstream 20037 14796531 ~ 14797150 (+) True G117389
AMCG00018588 mRNA upstream 44125 14707571 ~ 14731664 (+) True AMCG00018588
AMCG00018586 mRNA upstream 128957 14630062 ~ 14646832 (+) True AMCG00018586
AMCG00018585 mRNA upstream 161344 14599262 ~ 14614445 (+) True AMCG00018585
AMCG00018577 mRNA upstream 187761 14574260 ~ 14588028 (+) True AMCG00018577
AMCG00018581 mRNA upstream 217989 14554089 ~ 14557800 (+) True AMCG00018581
AMCG00018593 mRNA downstream 45497 14821991 ~ 14824758 (+) True AMCG00018593
AMCG00018600 mRNA downstream 55006 14831500 ~ 14834064 (+) True AMCG00018600
AMCG00018608 mRNA downstream 150668 14927162 ~ 14927524 (+) True AMCG00018608
AMCG00018603 mRNA downstream 173142 14949636 ~ 14954263 (+) True AMCG00018603
AMCG00018602 mRNA downstream 178180 14954674 ~ 14981705 (+) True AMCG00018602
TU146792 other upstream 428048 14345090 ~ 14347741 (+) True G117178
TU146730 other upstream 533752 14239498 ~ 14242037 (+) False AMCG00018551
TU146688 other upstream 584712 14189003 ~ 14191077 (+) True AMCG00018553
TU146633 other upstream 630211 14141377 ~ 14145578 (+) False AMCG00018538
TU146602 other upstream 726636 14046259 ~ 14049153 (+) True G117033
TU147084 other downstream 10129 14786623 ~ 14788133 (+) True G117383
TU147178 other downstream 178070 14954564 ~ 14956580 (+) False AMCG00018602
TU147595 other downstream 2291718 17068212 ~ 17069670 (+) True G117786
TU147848 other downstream 3204716 17981210 ~ 17982114 (+) False AMCG00018681
TU147849 other downstream 3204716 17981210 ~ 17982303 (+) False AMCG00018681

Expression Profile