RNA id: TU147083



Basic Information


Item Value
RNA id TU147083
length 463
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G117382
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14786025 ~ 14786487 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTCCTGGATTCCAGAACACTTAAACAATAGCCACTGAAAGACATTGTGCTctaagaatgtattatttttttataacctttTCGTTGTAAAGAACAATGATATCATATTGTGTGCTAGAGTagaatttaaaatcataataaacaatgaCTCACTGAGTTAATTTAGCTGCAATTCATCcacaagtgagagagagagagagagagagagaaccccACCCCCAACACTCACATCCAGTATGGGCCCGTTGCAATAGTGGCATCGGGGGGAGAACAGGTTGTGGTAGTCCCGCTCGCAGTAGGGCTGCCCGTCACGCTCAAAGAAGTTCCTGGAGCCGATCTCCTCCTGGCAGTGTGTGCACACAAAGTGCTCGGGGTGCCACGTCCTGCCCATTGCCGTCACCacctgtgggggagagagaaagacagacagatggagagaaagagaaaaagaaagggaaagataA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU147082 lncRNA upstream 1692 14783506 ~ 14784333 (+) True G117381
TU147077 lncRNA upstream 8915 14774115 ~ 14777110 (+) True G117379
TU147070 lncRNA upstream 10785 14774115 ~ 14775240 (+) False G117379
TU147072 lncRNA upstream 10785 14774115 ~ 14775240 (+) False G117379
TU147073 lncRNA upstream 10785 14774115 ~ 14775240 (+) False G117379
TU147088 lncRNA downstream 6309 14792796 ~ 14793804 (+) True G117387
TU147089 lncRNA downstream 7398 14793885 ~ 14794239 (+) True G117388
TU147090 lncRNA downstream 10044 14796531 ~ 14797150 (+) True G117389
TU147080 lncRNA downstream 68592 14855079 ~ 14899918 (+) True G117380
TU147252 lncRNA downstream 705759 15492246 ~ 15529312 (+) True G117521
AMCG00018588 mRNA upstream 54361 14707571 ~ 14731664 (+) True AMCG00018588
AMCG00018586 mRNA upstream 139193 14630062 ~ 14646832 (+) True AMCG00018586
AMCG00018585 mRNA upstream 171580 14599262 ~ 14614445 (+) True AMCG00018585
AMCG00018577 mRNA upstream 197997 14574260 ~ 14588028 (+) True AMCG00018577
AMCG00018581 mRNA upstream 228225 14554089 ~ 14557800 (+) True AMCG00018581
AMCG00018593 mRNA downstream 35504 14821991 ~ 14824758 (+) True AMCG00018593
AMCG00018600 mRNA downstream 45013 14831500 ~ 14834064 (+) True AMCG00018600
AMCG00018608 mRNA downstream 140675 14927162 ~ 14927524 (+) True AMCG00018608
AMCG00018603 mRNA downstream 163149 14949636 ~ 14954263 (+) True AMCG00018603
AMCG00018602 mRNA downstream 168187 14954674 ~ 14981705 (+) True AMCG00018602
TU147075 other upstream 9531 14775789 ~ 14776494 (+) False G117379
TU146792 other upstream 438284 14345090 ~ 14347741 (+) True G117178
TU146730 other upstream 543988 14239498 ~ 14242037 (+) False AMCG00018551
TU146688 other upstream 594948 14189003 ~ 14191077 (+) True AMCG00018553
TU146633 other upstream 640447 14141377 ~ 14145578 (+) False AMCG00018538
TU147084 other downstream 136 14786623 ~ 14788133 (+) True G117383
TU147178 other downstream 168077 14954564 ~ 14956580 (+) False AMCG00018602
TU147595 other downstream 2281725 17068212 ~ 17069670 (+) True G117786
TU147848 other downstream 3194723 17981210 ~ 17982114 (+) False AMCG00018681
TU147849 other downstream 3194723 17981210 ~ 17982303 (+) False AMCG00018681

Expression Profile