RNA id: TU148455



Basic Information


Item Value
RNA id TU148455
length 438
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G118470
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20058972 ~ 20059409 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CGAAGTGCACATGCCTACCCTTTGTGTCCAGCTCCACGTGGATGATGTTTCCCATGACAGAAGTGTTGTTCAGGTTCTGCACGGCATCTTTCGCCGACTTTACCGAGCCAAATATAACTTTGGCAATGCCCaggtgctttttgtttttcggATTGTATAGGATTTCCACCTCCTCGATGTCTCCGAATTTCTTGCACATGTCGGAGAGAAAACCTTCCCTGATGTTGTCGTTCAACTTGGCAAATGTGACCTCCTTCGGGGGAACGGGGCCGACATAACACTCGTCGATCTGAAGACAAAAAGCAAATATGATGACGGTGGAGACTATACTTTGGTGACCATTTAGCTATAAATCATTTCCTACAAGAAAGCGTGTTATCACCTACTCGTGTCAGTGTGACAGCGAGTTCCTTatagtgcgtgtgtgtgtataggtgC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU148452 lncRNA downstream 1427 20056479 ~ 20057545 (-) True G118469
TU148448 lncRNA downstream 23315 20033210 ~ 20035657 (-) True G118466
TU148418 lncRNA downstream 64613 19994143 ~ 19994359 (-) True G118440
TU148241 lncRNA downstream 479940 19577014 ~ 19579032 (-) True G118305
TU148235 lncRNA downstream 526829 19499525 ~ 19532143 (-) True G118299
TU148459 lncRNA upstream 13942 20073351 ~ 20074161 (-) True G118474
TU148460 lncRNA upstream 17416 20076825 ~ 20077042 (-) True G118475
TU148461 lncRNA upstream 17867 20077276 ~ 20077892 (-) True G118476
TU148463 lncRNA upstream 20557 20079966 ~ 20080327 (-) True G118478
TU148464 lncRNA upstream 21979 20081388 ~ 20081663 (-) True G118479
AMCG00018765 mRNA downstream 8729 20036729 ~ 20050243 (-) True AMCG00018765
AMCG00018766 mRNA downstream 26465 19991333 ~ 20032507 (-) True AMCG00018766
AMCG00018760 mRNA downstream 101705 19923370 ~ 19957267 (-) True AMCG00018760
AMCG00018761 mRNA downstream 145700 19894850 ~ 19913272 (-) True AMCG00018761
AMCG00018756 mRNA downstream 187078 19864992 ~ 19871894 (-) True AMCG00018756
AMCG00018771 mRNA upstream 27731 20087140 ~ 20094506 (-) True AMCG00018771
AMCG00018777 mRNA upstream 158968 20218377 ~ 20225057 (-) True AMCG00018777
AMCG00018780 mRNA upstream 169762 20229171 ~ 20279538 (-) True AMCG00018780
AMCG00018778 mRNA upstream 244355 20303764 ~ 20309717 (-) True AMCG00018778
AMCG00018779 mRNA upstream 253776 20313185 ~ 20321631 (-) True AMCG00018779
TU148412 other downstream 70804 19987674 ~ 19988168 (-) True G118434
TU148096 other downstream 1011395 19045682 ~ 19047577 (-) False AMCG00018723
TU147953 other downstream 1584727 18466368 ~ 18474245 (-) True G118075
TU147734 other downstream 2455124 17603356 ~ 17603848 (-) True G117899
TU147640 other downstream 2802701 17226090 ~ 17256271 (-) False G117823
TU148462 other upstream 18679 20078088 ~ 20079882 (-) True G118477
TU148710 other upstream 385088 20444497 ~ 20457523 (-) False AMCG00018788
TU148728 other upstream 430802 20490211 ~ 20490738 (-) False AMCG00018790
TU148729 other upstream 544109 20603518 ~ 20605820 (-) False AMCG00018794
TU148730 other upstream 544109 20603518 ~ 20605820 (-) False AMCG00018794

Expression Profile