RNA id: TU148463


Basic Information

Item Value
RNA id TU148463
length 362
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G118478
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20079966 ~ 20080327 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGAAAATCAAAACTACAACAGCCCTAGCCAGGTACAGATGCTTGTTAAATCCGTTCACGTAGAAGAAAACAACCAGTTAAGAGAGGATTATATCCGCATATTTTGTGTTATCTGAAGCACAagaacacacgcacacgcacaccccAGGCCGGCTCTCACCTGCGTGTCTAAGAGAGGCTCTTCAGTGAGTGGCCGAGTGCTGTTGAGGTATTTCAGTTTGTCCTTCTTGTCGATTTTGTAATAGCCTTCACTGCGAGCGCAACCAGTTACGTGATCCCTCATCCCATCATCGCGCTTCTTCTTCTTAACAAATGGTATGCTGGTCGGTACAAGggaattaaggaaaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU148461 lncRNA downstream 2074 20077276 ~ 20077892 (-) True G118476
TU148460 lncRNA downstream 2924 20076825 ~ 20077042 (-) True G118475
TU148459 lncRNA downstream 5805 20073351 ~ 20074161 (-) True G118474
TU148455 lncRNA downstream 20557 20058972 ~ 20059409 (-) True G118470
TU148452 lncRNA downstream 22421 20056479 ~ 20057545 (-) True G118469
TU148464 lncRNA upstream 1061 20081388 ~ 20081663 (-) True G118479
TU148494 lncRNA upstream 36124 20116451 ~ 20124488 (-) True G118502
TU148507 lncRNA upstream 72400 20152727 ~ 20152987 (-) True G118515
TU148510 lncRNA upstream 87791 20168118 ~ 20168331 (-) True G118518
TU148532 lncRNA upstream 134443 20214770 ~ 20217179 (-) True G118536
AMCG00018765 mRNA downstream 29723 20036729 ~ 20050243 (-) True AMCG00018765
AMCG00018766 mRNA downstream 47459 19991333 ~ 20032507 (-) True AMCG00018766
AMCG00018760 mRNA downstream 122699 19923370 ~ 19957267 (-) True AMCG00018760
AMCG00018761 mRNA downstream 166694 19894850 ~ 19913272 (-) True AMCG00018761
AMCG00018756 mRNA downstream 208072 19864992 ~ 19871894 (-) True AMCG00018756
AMCG00018771 mRNA upstream 6813 20087140 ~ 20094506 (-) True AMCG00018771
AMCG00018777 mRNA upstream 138050 20218377 ~ 20225057 (-) True AMCG00018777
AMCG00018780 mRNA upstream 148844 20229171 ~ 20279538 (-) True AMCG00018780
AMCG00018778 mRNA upstream 223437 20303764 ~ 20309717 (-) True AMCG00018778
AMCG00018779 mRNA upstream 232858 20313185 ~ 20321631 (-) True AMCG00018779
TU148462 other downstream 84 20078088 ~ 20079882 (-) True G118477
TU148412 other downstream 91798 19987674 ~ 19988168 (-) True G118434
TU148096 other downstream 1032389 19045682 ~ 19047577 (-) False AMCG00018723
TU147953 other downstream 1605721 18466368 ~ 18474245 (-) True G118075
TU147734 other downstream 2476118 17603356 ~ 17603848 (-) True G117899
TU148710 other upstream 364170 20444497 ~ 20457523 (-) False AMCG00018788
TU148728 other upstream 409884 20490211 ~ 20490738 (-) False AMCG00018790
TU148729 other upstream 523191 20603518 ~ 20605820 (-) False AMCG00018794
TU148730 other upstream 523191 20603518 ~ 20605820 (-) False AMCG00018794
TU148773 other upstream 616507 20696834 ~ 20697827 (-) False G118727

Expression Profile