RNA id: TU148510


Basic Information

Item Value
RNA id TU148510
length 214
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G118518
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20168118 ~ 20168331 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atactggagtgatgtgttcatgtttttttgtttttgttaggattcttgcagcagcattttggactaactgaagtgcagaaatagctctgtttgtgctgcctgacagaatggcattacagtaatccaatctagatgtaacaaatgcgtgtatcaatttctcagtgtcctgtaatgagaggaattgtcttagtctagcaatgtttctaagatggag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU148507 lncRNA downstream 15131 20152727 ~ 20152987 (-) True G118515
TU148494 lncRNA downstream 43630 20116451 ~ 20124488 (-) True G118502
TU148464 lncRNA downstream 86455 20081388 ~ 20081663 (-) True G118479
TU148463 lncRNA downstream 87791 20079966 ~ 20080327 (-) True G118478
TU148461 lncRNA downstream 90226 20077276 ~ 20077892 (-) True G118476
TU148532 lncRNA upstream 46439 20214770 ~ 20217179 (-) True G118536
TU148709 lncRNA upstream 270628 20438959 ~ 20443273 (-) True AMCG00018788
TU148726 lncRNA upstream 314553 20482884 ~ 20485106 (-) True G118692
TU148731 lncRNA upstream 438497 20606828 ~ 20607086 (-) True G118696
TU148739 lncRNA upstream 476554 20644885 ~ 20678437 (-) False AMCG00018797
AMCG00018771 mRNA downstream 73612 20087140 ~ 20094506 (-) True AMCG00018771
AMCG00018765 mRNA downstream 117875 20036729 ~ 20050243 (-) True AMCG00018765
AMCG00018766 mRNA downstream 135611 19991333 ~ 20032507 (-) True AMCG00018766
AMCG00018760 mRNA downstream 210851 19923370 ~ 19957267 (-) True AMCG00018760
AMCG00018761 mRNA downstream 254846 19894850 ~ 19913272 (-) True AMCG00018761
AMCG00018777 mRNA upstream 50046 20218377 ~ 20225057 (-) True AMCG00018777
AMCG00018780 mRNA upstream 60840 20229171 ~ 20279538 (-) True AMCG00018780
AMCG00018778 mRNA upstream 135433 20303764 ~ 20309717 (-) True AMCG00018778
AMCG00018779 mRNA upstream 144854 20313185 ~ 20321631 (-) True AMCG00018779
AMCG00018776 mRNA upstream 181245 20349576 ~ 20362936 (-) True AMCG00018776
TU148462 other downstream 88236 20078088 ~ 20079882 (-) True G118477
TU148412 other downstream 179950 19987674 ~ 19988168 (-) True G118434
TU148096 other downstream 1120541 19045682 ~ 19047577 (-) False AMCG00018723
TU147953 other downstream 1693873 18466368 ~ 18474245 (-) True G118075
TU147734 other downstream 2564270 17603356 ~ 17603848 (-) True G117899
TU148710 other upstream 276166 20444497 ~ 20457523 (-) False AMCG00018788
TU148728 other upstream 321880 20490211 ~ 20490738 (-) False AMCG00018790
TU148729 other upstream 435187 20603518 ~ 20605820 (-) False AMCG00018794
TU148730 other upstream 435187 20603518 ~ 20605820 (-) False AMCG00018794
TU148773 other upstream 528503 20696834 ~ 20697827 (-) False G118727

Expression Profile