RNA id: TU148644



Basic Information


Item Value
RNA id TU148644
length 332
RNA type TUCP
GC content 0.65
exon number 1
gene id G118623
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20514160 ~ 20514491 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTCCTCTCTTGGATGAGCGGGACGACTTGGAGGAGGTGGACCACTGCTTCGTGAGCCCTGCCCGGCCTTGCAGGGAATCTGCCATGGCCCCGGCCGGCTCCTCGGCCTCAATGGAGGACATGGCCTTGGTCTCCTGGTCCTTGTCCCCTGGCGAGGCGCTGGCCCCGTTCTGCTCAGCCTCCTCGCTGCAACTGAACTGCGCCATCTTCTGGGCCAGCATCAGCTGCGTTTCGCGCTCCAGCTGCCGGATGTCGTCGATCGTCAGCCCGTACCACTCATCTTGCCAGCACCAGGCTTGGCGGTGGGCCCTCACCATCACCTTCCGCAGACCt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU148643 lncRNA upstream 9653 20504116 ~ 20504507 (+) True G118622
TU148642 lncRNA upstream 12727 20500950 ~ 20501433 (+) True G118621
TU148641 lncRNA upstream 13950 20499674 ~ 20500210 (+) True G118620
TU148639 lncRNA upstream 23054 20490861 ~ 20491106 (+) True G118618
TU148629 lncRNA upstream 70931 20438960 ~ 20443229 (+) True G118608
TU148645 lncRNA downstream 2768 20517259 ~ 20517494 (+) True G118624
TU148646 lncRNA downstream 8947 20523438 ~ 20523721 (+) True G118625
TU148647 lncRNA downstream 22243 20536734 ~ 20576007 (+) True G118626
TU148651 lncRNA downstream 71137 20585628 ~ 20590502 (+) True G118630
TU148654 lncRNA downstream 76072 20590563 ~ 20591175 (+) True G118633
AMCG00018782 mRNA upstream 29231 20477126 ~ 20484929 (+) True AMCG00018782
AMCG00018789 mRNA upstream 50811 20457965 ~ 20463349 (+) True AMCG00018789
AMCG00018783 mRNA upstream 80505 20408073 ~ 20433655 (+) True AMCG00018783
AMCG00018784 mRNA upstream 115823 20383129 ~ 20398337 (+) True AMCG00018784
AMCG00018781 mRNA upstream 139413 20374037 ~ 20374747 (+) False AMCG00018781
AMCG00018792 mRNA downstream 87520 20602011 ~ 20603279 (+) False AMCG00018792
AMCG00018793 mRNA downstream 116512 20631003 ~ 20637704 (+) True AMCG00018793
AMCG00018791 mRNA downstream 127838 20642329 ~ 20645241 (+) True AMCG00018791
AMCG00018799 mRNA downstream 156345 20670836 ~ 20678821 (+) True AMCG00018799
AMCG00018800 mRNA downstream 164789 20679280 ~ 20695194 (+) True AMCG00018800
TU148611 other upstream 139348 20373996 ~ 20374812 (+) False AMCG00018781
TU148559 other upstream 253220 20259377 ~ 20260940 (+) True G118557
TU148369 other upstream 539430 19971139 ~ 19974730 (+) True AMCG00018762
TU148213 other upstream 1063532 19448626 ~ 19450628 (+) False AMCG00018740
TU147936 other upstream 1792817 18719206 ~ 18721343 (+) True AMCG00018702
TU148656 other downstream 78245 20592736 ~ 20593016 (+) True G118635
TU148657 other downstream 78875 20593366 ~ 20594139 (+) True G118636
TU148663 other downstream 87465 20601956 ~ 20603315 (+) True AMCG00018792
TU148789 other downstream 241138 20755629 ~ 20756220 (+) False AMCG00018802
TU148883 other downstream 673465 21187956 ~ 21189246 (+) True G118815

Expression Profile