RNA id: TU148655



Basic Information


Item Value
RNA id TU148655
length 348
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G118634
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20592075 ~ 20592422 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCTGCTCCTGAAGGCTGTGAATGGCTCTGCATGCTGTGACGTGACTTCACAGTATTTTCATGTTCCAGCTGCTTTATTTGAGTTTCAAGCTTCGAAATGATCCTGGAAAGAAAGACGAGATTCATCCAGCTGCCACAACAGAAGTGTGAAGCACTTGAATCTCACATTGCGAATATTCACAAAAAACTTGCACGTCTAGAATTAGAACTTCAATCAAGAACCAAAAAGTAGTTTCACATACCTGCAAACAGgacttaaaaacaacagaaagggTTTTAATTACCTCTTCAGTTCAGATATCTGTGCATTAGCATCAAAGAGCTTGTTCTCTGTTGAAACCAAAGTGTc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU148653 lncRNA upstream 150 20591685 ~ 20591925 (+) True G118632
TU148652 lncRNA upstream 525 20591193 ~ 20591550 (+) True G118631
TU148654 lncRNA upstream 900 20590563 ~ 20591175 (+) True G118633
TU148651 lncRNA upstream 1573 20585628 ~ 20590502 (+) True G118630
TU148647 lncRNA upstream 16068 20536734 ~ 20576007 (+) True G118626
TU148658 lncRNA downstream 2751 20595173 ~ 20595580 (+) True G118637
TU148659 lncRNA downstream 4046 20596468 ~ 20596692 (+) True G118638
TU148660 lncRNA downstream 4679 20597101 ~ 20597607 (+) True G118639
TU148661 lncRNA downstream 5453 20597875 ~ 20598118 (+) True G118640
TU148662 lncRNA downstream 7369 20599791 ~ 20600356 (+) True G118641
AMCG00018782 mRNA upstream 107146 20477126 ~ 20484929 (+) True AMCG00018782
AMCG00018789 mRNA upstream 128726 20457965 ~ 20463349 (+) True AMCG00018789
AMCG00018783 mRNA upstream 158420 20408073 ~ 20433655 (+) True AMCG00018783
AMCG00018784 mRNA upstream 193738 20383129 ~ 20398337 (+) True AMCG00018784
AMCG00018781 mRNA upstream 217328 20374037 ~ 20374747 (+) False AMCG00018781
AMCG00018792 mRNA downstream 9589 20602011 ~ 20603279 (+) False AMCG00018792
AMCG00018793 mRNA downstream 38581 20631003 ~ 20637704 (+) True AMCG00018793
AMCG00018791 mRNA downstream 49907 20642329 ~ 20645241 (+) True AMCG00018791
AMCG00018799 mRNA downstream 78414 20670836 ~ 20678821 (+) True AMCG00018799
AMCG00018800 mRNA downstream 86858 20679280 ~ 20695194 (+) True AMCG00018800
TU148644 other upstream 77584 20514160 ~ 20514491 (+) True G118623
TU148611 other upstream 217263 20373996 ~ 20374812 (+) False AMCG00018781
TU148559 other upstream 331135 20259377 ~ 20260940 (+) True G118557
TU148369 other upstream 617345 19971139 ~ 19974730 (+) True AMCG00018762
TU148213 other upstream 1141447 19448626 ~ 19450628 (+) False AMCG00018740
TU148656 other downstream 314 20592736 ~ 20593016 (+) True G118635
TU148657 other downstream 944 20593366 ~ 20594139 (+) True G118636
TU148663 other downstream 9534 20601956 ~ 20603315 (+) True AMCG00018792
TU148789 other downstream 163207 20755629 ~ 20756220 (+) False AMCG00018802
TU148883 other downstream 595534 21187956 ~ 21189246 (+) True G118815

Expression Profile