RNA id: TU149154



Basic Information


Item Value
RNA id TU149154
length 207
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G119005
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 22558213 ~ 22558419 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGACCGGTCTTTATTTCCATAAACTGCCATAAAAAGTACTTGTGAACACCTTTCCTATTACCTGTAACACACTCGCCCCACACACCCTCCCACTCAGTTCTGGACTACGTGACGTGGCATTTTggagttaatttaatttaaatgcactCCTCACACATAAGAGGTGCCCCAGGATATGTAACCATATTGTTAAATCCCTTGCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU149148 lncRNA upstream 10522 22547272 ~ 22547691 (+) True G118999
TU149036 lncRNA upstream 705156 21848415 ~ 21853057 (+) False AMCG00018820
TU149002 lncRNA upstream 876490 21681320 ~ 21681723 (+) True G118885
TU148961 lncRNA upstream 1135443 21370910 ~ 21422770 (+) True G118863
TU148823 lncRNA upstream 1626809 20922368 ~ 20931404 (+) True G118771
TU149155 lncRNA downstream 2643 22561062 ~ 22561280 (+) True G119006
TU149156 lncRNA downstream 4133 22562552 ~ 22562810 (+) True G119007
TU149157 lncRNA downstream 5951 22564370 ~ 22564707 (+) True G119008
TU149158 lncRNA downstream 6939 22565358 ~ 22565611 (+) True G119009
TU149159 lncRNA downstream 9347 22567766 ~ 22567980 (+) True G119010
AMCG00018832 mRNA upstream 97796 22455239 ~ 22460417 (+) True AMCG00018832
AMCG00018833 mRNA upstream 108884 22440803 ~ 22449329 (+) True AMCG00018833
AMCG00018834 mRNA upstream 135399 22401501 ~ 22422814 (+) True AMCG00018834
AMCG00018827 mRNA upstream 419920 22115610 ~ 22138293 (+) True AMCG00018827
AMCG00018829 mRNA upstream 466595 22091346 ~ 22091618 (+) True AMCG00018829
AMCG00018836 mRNA downstream 45932 22604351 ~ 22627498 (+) True AMCG00018836
AMCG00018838 mRNA downstream 72126 22630545 ~ 22636051 (+) True AMCG00018838
AMCG00018837 mRNA downstream 92720 22651139 ~ 22659793 (+) True AMCG00018837
AMCG00018847 mRNA downstream 126458 22684877 ~ 22692816 (+) True AMCG00018847
AMCG00018845 mRNA downstream 153273 22711692 ~ 22719425 (+) True AMCG00018845
TU148883 other upstream 1368967 21187956 ~ 21189246 (+) True G118815
TU148789 other upstream 1801993 20755629 ~ 20756220 (+) False AMCG00018802
TU148663 other upstream 1954898 20601956 ~ 20603315 (+) True AMCG00018792
TU148657 other upstream 1964074 20593366 ~ 20594139 (+) True G118636
TU148656 other upstream 1965197 20592736 ~ 20593016 (+) True G118635
TU149795 other downstream 2675663 25234082 ~ 25267781 (+) True G119507
TU149874 other downstream 2925878 25484297 ~ 25485446 (+) False AMCG00018913
TU150090 other downstream 3902201 26460620 ~ 26461227 (+) True G119762

Expression Profile