RNA id: TU149159



Basic Information


Item Value
RNA id TU149159
length 215
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G119010
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 22567766 ~ 22567980 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGTACTAGAAAAAGGACATTTCAACTCTTATGCCTTTGCAAGTGAACATAAAAGTTCAAATGGCAAACCAACCGTTCTGTATTCAGATAAACCCATTAGCTTCACAAGGAATACAGTGATCGTACAACATGTATGCCTGACTGATGTCAAGCACCTTTCAGTACTGACCTGTCCGGACACACACAGATGTCATGCATGTAGAATTTAATGGCTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU149158 lncRNA upstream 2155 22565358 ~ 22565611 (+) True G119009
TU149157 lncRNA upstream 3059 22564370 ~ 22564707 (+) True G119008
TU149156 lncRNA upstream 4956 22562552 ~ 22562810 (+) True G119007
TU149155 lncRNA upstream 6486 22561062 ~ 22561280 (+) True G119006
TU149154 lncRNA upstream 9347 22558213 ~ 22558419 (+) True G119005
TU149162 lncRNA downstream 7479 22575459 ~ 22575690 (+) True G119013
TU149163 lncRNA downstream 8742 22576722 ~ 22576960 (+) True G119014
TU149164 lncRNA downstream 9521 22577501 ~ 22577713 (+) True G119015
TU149165 lncRNA downstream 11071 22579051 ~ 22579336 (+) True G119016
TU149242 lncRNA downstream 98912 22666892 ~ 22667141 (+) True G119071
AMCG00018832 mRNA upstream 107349 22455239 ~ 22460417 (+) True AMCG00018832
AMCG00018833 mRNA upstream 118437 22440803 ~ 22449329 (+) True AMCG00018833
AMCG00018834 mRNA upstream 144952 22401501 ~ 22422814 (+) True AMCG00018834
AMCG00018827 mRNA upstream 429473 22115610 ~ 22138293 (+) True AMCG00018827
AMCG00018829 mRNA upstream 476148 22091346 ~ 22091618 (+) True AMCG00018829
AMCG00018836 mRNA downstream 36371 22604351 ~ 22627498 (+) True AMCG00018836
AMCG00018838 mRNA downstream 62565 22630545 ~ 22636051 (+) True AMCG00018838
AMCG00018837 mRNA downstream 83159 22651139 ~ 22659793 (+) True AMCG00018837
AMCG00018847 mRNA downstream 116897 22684877 ~ 22692816 (+) True AMCG00018847
AMCG00018845 mRNA downstream 143712 22711692 ~ 22719425 (+) True AMCG00018845
TU148883 other upstream 1378520 21187956 ~ 21189246 (+) True G118815
TU148789 other upstream 1811546 20755629 ~ 20756220 (+) False AMCG00018802
TU148663 other upstream 1964451 20601956 ~ 20603315 (+) True AMCG00018792
TU148657 other upstream 1973627 20593366 ~ 20594139 (+) True G118636
TU148656 other upstream 1974750 20592736 ~ 20593016 (+) True G118635
TU149795 other downstream 2666102 25234082 ~ 25267781 (+) True G119507
TU149874 other downstream 2916317 25484297 ~ 25485446 (+) False AMCG00018913
TU150090 other downstream 3892640 26460620 ~ 26461227 (+) True G119762

Expression Profile