RNA id: TU149701



Basic Information


Item Value
RNA id TU149701
length 285
lncRNA type inter_gene
GC content 0.52
exon number 3
gene id G119426
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 24836787 ~ 24842121 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAGAAAGTGAGTGCACAAATAGCCACAACGCAAACAGCTGAAGAGGAGTGAGCTGGTATCTAAAATCaatagccccctctgaggggcCGAAGAGGCACCTTGACCCCCAGCCATGGAAGTCTTGACGAAGCACCCCAGAGGGCTGTTGATGCACCCCACTACGGAGGGCTAACGGGGCATCCAGTGGTTGCAACCACTTCAACCCCAAGGGTTTAAATGACAATCGGTTACAATTTAAAGGTTTTCCATCATCCGACAGCTGGAAAGGATGCTGGTGAACAACTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU149635 lncRNA downstream 228325 24519413 ~ 24608462 (-) True G119382
TU149638 lncRNA downstream 268488 24566146 ~ 24568299 (-) True G119384
TU149444 lncRNA downstream 1725267 23109601 ~ 23111520 (-) True G119235
TU149381 lncRNA downstream 1852015 22984184 ~ 22984772 (-) True G119181
TU149380 lncRNA downstream 1853221 22982866 ~ 22983566 (-) True G119180
TU149749 lncRNA upstream 202830 25044951 ~ 25045344 (-) True G119466
TU149859 lncRNA upstream 420241 25262362 ~ 25333175 (-) True G119557
TU149903 lncRNA upstream 636889 25479010 ~ 25479524 (-) True G119600
TU149919 lncRNA upstream 729933 25572054 ~ 25578122 (-) True G119615
TU149942 lncRNA upstream 748451 25590572 ~ 25656954 (-) True G119632
AMCG00018891 mRNA downstream 10049 24821217 ~ 24826738 (-) True AMCG00018891
AMCG00018893 mRNA downstream 28880 24799019 ~ 24807907 (-) True AMCG00018893
AMCG00018890 mRNA downstream 60087 24756869 ~ 24776700 (-) True AMCG00018890
AMCG00018887 mRNA downstream 100636 24715823 ~ 24736151 (-) True AMCG00018887
AMCG00018889 mRNA downstream 145973 24660466 ~ 24690814 (-) True AMCG00018889
AMCG00018892 mRNA upstream 14093 24856214 ~ 24876807 (-) True AMCG00018892
AMCG00018894 mRNA upstream 47510 24889631 ~ 24934952 (-) True AMCG00018894
AMCG00018895 mRNA upstream 118957 24961078 ~ 25007942 (-) True AMCG00018895
AMCG00018896 mRNA upstream 229421 25071542 ~ 25073116 (-) True AMCG00018896
AMCG00018898 mRNA upstream 233277 25075398 ~ 25084586 (-) True AMCG00018898
TU149337 other downstream 2030449 22804345 ~ 22806338 (-) True G119144
TU149076 other downstream 2723092 22080464 ~ 22113695 (-) True G118936
TU148773 other downstream 4138960 20696834 ~ 20697827 (-) False G118727
TU148729 other downstream 4230967 20603518 ~ 20605820 (-) False AMCG00018794
TU149755 other upstream 233277 25075398 ~ 25077580 (-) False AMCG00018898
TU149831 other upstream 292650 25134771 ~ 25171644 (-) True G119538
TU149840 other upstream 344086 25186207 ~ 25187408 (-) True G119545
TU150163 other upstream 1971359 26813480 ~ 26814073 (-) True G119827
TU150237 other upstream 2388752 27230873 ~ 27242574 (-) True G119893

Expression Profile